Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12102g00002 ATGTTTTTGGGGTGGCCAGGATCTTTATGGAAACCCTTGTTGAGTGTGCCAGTAATTGTCGTTGCAATATTGCTTGTGGTTATTATGGTAAAATGTTTGTCGAAGAAGCGTCGTAGACAGGTTGACTTGAAAGAGATCACTGCGTGGTCAGGATTGTACTGGTTCTGCAAAAGCGAAATTGAGAAGGCCATGAATTATGCTGGTGAAAAGATAAGCCTTGGACGTGGAAGTGCAGGTCAGGTGTATAGAGGCGTTCTACCCAGTGGTCAAGTCGTGGCCATCAAACATTTAACGAGGAGTAACACCTCTGAGTCTTTCACTAGAGAAGTTGAAGGTCTTTCAAGGCTTCGCCATCCAAACCTGGTTTGTCTCTTTGGATGTTGCATAGAAGGCGACGAGAGATATTTAGTCTATGAATTTTGTGCAAACGGGAATCTAGCTCAACATCTCTTAAGAAGAGATAGCCACTTGACATGGGAAACAAGAGTGAAAATTTTGAGAGATTGTTCATTTGCACTCAAGTACCTCCACCATCATATAGAAGGCTGTGTTGTCCATCGAGATATAAAGCTTACGAACATTCTTTTGACTGAGAAATATCAAGCCAAACTGTCGGATTTTGGACTGGCAAAGGTGATGGGGATTAAAGAGAGCAAGGTTTTTACTGATGTTAGAGGAACCATAGGGTACATGGATCCAGAGTACATGAGTAATTCCAAGCTAACCTGCGCCAGTGATGTATACAGTTTTGGTATTGTTGCTCTACAAATTCTGTCTGGACAGAAAGTCATAGAGTTGGATCTTGATGCCAGAGATCAGCTCACTAGGAAGGCAAGAGATGTGAGTATGGGTAAGCGTCCATTGTCTGATTTTGAAGACCCGCGGCTAAATGGACAGGTTGATAAGGCAGACTTCGAAGCCATCCTGCAGATTGCAGTGTTGTGTGTTGCCAAATCAAGCAAAGGTCGCCCAACCATTGAGGTTGTTTTTGAGGAATTGGACAAGGTTTGCAGGGACACACAAACGCGAATGAAGCCAAAGGATGAGAGCTCATCAACAACATCCACCCCGAGCTCCAAATCCTCCAAATCGGTTCCTCTTTGA 1104 0.4384 MFLGWPGSLWKPLLSVPVIVVAILLVVIMVKCLSKKRRRQVDLKEITAWSGLYWFCKSEIEKAMNYAGEKISLGRGSAGQVYRGVLPSGQVVAIKHLTRSNTSESFTREVEGLSRLRHPNLVCLFGCCIEGDERYLVYEFCANGNLAQHLLRRDSHLTWETRVKILRDCSFALKYLHHHIEGCVVHRDIKLTNILLTEKYQAKLSDFGLAKVMGIKESKVFTDVRGTIGYMDPEYMSNSKLTCASDVYSFGIVALQILSGQKVIELDLDARDQLTRKARDVSMGKRPLSDFEDPRLNGQVDKADFEAILQIAVLCVAKSSKGRPTIEVVFEELDKVCRDTQTRMKPKDESSSTTSTPSSKSSKSVPL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12102g00002 367 Pfam Protein kinase domain 72 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12102g00002 367 SMART serkin_6 68 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12102g00002 367 MobiDBLite consensus disorder prediction 339 367 - -
Mupr12102g00002 367 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 10 353 - -
Mupr12102g00002 367 Gene3D Transferase(Phosphotransferase) domain 1 141 361 - -
Mupr12102g00002 367 Gene3D Phosphorylase Kinase; domain 1 28 140 - -
Mupr12102g00002 367 SUPERFAMILY Protein kinase-like (PK-like) 50 333 IPR011009 -
Mupr12102g00002 367 ProSiteProfiles Protein kinase domain profile. 67 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12102g00002 367 MobiDBLite consensus disorder prediction 347 367 - -
Mupr12102g00002 367 FunFam Cysteine-rich receptor-like protein kinase 40 39 140 - -
Mupr12102g00002 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Mupr12102g00002 367 PIRSF TyrPK_CSF1-R 13 51 - -
Mupr12102g00002 367 PIRSF TyrPK_CSF1-R 88 181 - -
Mupr12102g00002 367 PIRSF TyrPK_CSF1-R 301 365 - -
Mupr12102g00002 367 PIRSF TyrPK_CSF1-R 173 262 - -
Mupr12102g00002 367 FunFam probable receptor-like protein kinase At5g59700 141 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12102g00002 Mupr-Chr12102 9296 11164 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12102g00002 73 352 Receptor kinase-like Gene Family AT1G51800 41.034 3.35e-57 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Mupr12102g00002 Pkinase 1.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12102g00002 - - gmx:100807158 622.468