LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr12102g00001	ATGAATTGTTTTCCGTGTTTTTCAAAGAGTAAGAAAAGCAATAGCAAGAGGGAGCATCAAGGGGCACCTGCGCCACAGCAGGAAAACGTTGTAACAAGAACACCACTGGATGTAAAGAAACCAAAGCCAGATGAACCAATCCAGGTTGACACTTCTACTATTCAAGCACAAAATTTCACATTCCGTGAGCTGGCAATTGCAACAAAGAATTTCCGCCAAGAATGCTTGATGGGTGAAGGTGGCTTTGGAAGAGTTTATAAGGGAACAATTCCAGCAACCGGGCAGGTGGTAGCAGTGAAGCAACTCGACCGAAATGGGATGCAAGGCAGTAAGGAATTTCTGGTTGAGGTTTTGATGTTAAGTCTCTTGAACCATGAAAATCTGGTCAAACTCACTGGTTATTGTGCTGATGGAGATCAACGTCTTTTGGTCTATGAGTTCATGCCAGGGCGCTCTTTAGAAGGCCGTCTTCTTGATAGAAAAGCAGATGAAGCTCCGTTAGATTGGTACAGCAGAATGAAAATAGCATCACATGCCGCTAAAGGACTATGGTACTTGCACGACAAGGCCAATCCTTCAGTTATATACCGGGACTTGAAATCCTCCAACATCTTGCTGGATAACGATCACAATGCAAAACTATCTGATTATGGACTGGCCAAACTTGTTGGTAAAGATAAGACGAACATTGTGCCCACAAGAGTTATGGGCACCTACGGTTACAGTGCTCCGGAGTACGTAAGAACAGGTAACCTCACCTTGAAATCAGATGTGTACAGTTTTGGAGTTGTCTTGCTAGAGCTCATAACCGGACGCCGAGCCGTTGACACCACAAGACCGCACGATGAGCAAAATCTAGTTTCATGGGCACAACCCATATTCAGGGACCCAAAAAGATATCCAGATATGGCAGATCCAAATCTGAAGAAACATTTCCCAGAAAAGGATCTGAACCAAGTTGTAGCAATTGCAGCCATGTGCTTACAGGAGGAAGCAGCAGCTCGTCCTCTGATGAGTGATGTGGTAACTGCTCTGAGTTTTCTTTCGACGACTGCTCCAGATGTTGTTCCTGGCAAGAGTGAAGCAGGATCTGACGAGGACAGCGGAAGCTCCGATGAAGAGAGTACTAGTGACGAGGACAATCGAACCGCTCAAAATCAGGAGACCAAGGAGTTTCACTCCAAGTCGAGCCGCAGCAGCAGATCAAAGAATGGAAGGAGTTCCAGTACTTCAGATTCAGAATCAGAACATGGAAGCATCTCAACCAGTAGGAAAAGTAGCAGCAAGAAATCTTCTGTGAGTAAGAAATCGTCTTTGAGCCAAAGAAGCAGCAAGAAATCATCAGTGAGAGTCTTAAGCCACATGGAAAGCACGGGCAAGGGGTCCGAGGATGGAAGACGTTCATCCAATTCAAGCACCAGTAGTGGAGTGTCACAAGATGGTGGTAGTATTCTTTTTGACCGTAGCGGAAGCAGGCCATCACAAGGGAATGTTTCGATTGGCCTAATCAGCAGCCAGAGTGTTCACTCAGATAATGACAGCAGCATAAGGTCCGTGGAAAGAACCACGCATTTAGATCATATCAGCAGCAGGGGATCAGAGGAGGGAAGTGTTCATTCG	1620	0.4586	MNCFPCFSKSKKSNSKREHQGAPAPQQENVVTRTPLDVKKPKPDEPIQVDTSTIQAQNFTFRELAIATKNFRQECLMGEGGFGRVYKGTIPATGQVVAVKQLDRNGMQGSKEFLVEVLMLSLLNHENLVKLTGYCADGDQRLLVYEFMPGRSLEGRLLDRKADEAPLDWYSRMKIASHAAKGLWYLHDKANPSVIYRDLKSSNILLDNDHNAKLSDYGLAKLVGKDKTNIVPTRVMGTYGYSAPEYVRTGNLTLKSDVYSFGVVLLELITGRRAVDTTRPHDEQNLVSWAQPIFRDPKRYPDMADPNLKKHFPEKDLNQVVAIAAMCLQEEAAARPLMSDVVTALSFLSTTAPDVVPGKSEAGSDEDSGSSDEESTSDEDNRTAQNQETKEFHSKSSRSSRSKNGRSSSTSDSESEHGSISTSRKSSSKKSSVSKKSSLSQRSSKKSSVRVLSHMESTGKGSEDGRRSSNSSTSSGVSQDGGSILFDRSGSRPSQGNVSIGLISSQSVHSDNDSSIRSVERTTHLDHISSRGSEEGSVHS	540

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr12102g00001	540	MobiDBLite	consensus disorder prediction	352	540	-	-
	Mupr12102g00001	540	MobiDBLite	consensus disorder prediction	514	540	-	-
	Mupr12102g00001	540	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	194	206	IPR008271	GO:0004672\|GO:0006468
	Mupr12102g00001	540	Gene3D	Phosphorylase Kinase; domain 1	43	147	-	-
	Mupr12102g00001	540	Pfam	Protein kinase domain	73	342	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr12102g00001	540	MobiDBLite	consensus disorder prediction	1	46	-	-
	Mupr12102g00001	540	MobiDBLite	consensus disorder prediction	375	398	-	-
	Mupr12102g00001	540	MobiDBLite	consensus disorder prediction	464	513	-	-
	Mupr12102g00001	540	Gene3D	Transferase(Phosphotransferase) domain 1	148	357	-	-
	Mupr12102g00001	540	MobiDBLite	consensus disorder prediction	19	33	-	-
	Mupr12102g00001	540	FunFam	probable serine/threonine-protein kinase RLCKVII	44	147	-	-
	Mupr12102g00001	540	CDD	STKc_IRAK	77	345	-	-
	Mupr12102g00001	540	ProSiteProfiles	Protein kinase domain profile.	71	348	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr12102g00001	540	MobiDBLite	consensus disorder prediction	401	455	-	-
	Mupr12102g00001	540	PANTHER	OS07G0668900 PROTEIN	3	354	-	-
	Mupr12102g00001	540	SMART	serkin_6	71	348	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr12102g00001	540	FunFam	Serine/threonine-protein kinase PBS1	148	362	-	-
	Mupr12102g00001	540	SUPERFAMILY	Protein kinase-like (PK-like)	57	355	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr12102g00001	Mupr-Chr12102	2366	4701	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr12102g00001	1	388	Glycoside Hydrolase	AT3G07070	61.750	2.72e-165	473

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-VIIa-1	Mupr12102g00001		Pkinase	4.5e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr12102g00001	-		-	gmx:100790911	709.138