Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1209g00009 ATGGATAGTAAGTTGATTCCCTCCTCGCCCACCTCACAACCCATCTTTCTGCCTTTCTCTTCATTGCTTTCCAAGCCAAGAATCTCTTTGATTCCTCTCTTCCTCTCTTTTTCAACCACTATTAACTCTCTTCTCCAATGCCCCTTCTTCTCCATCTTTCTCTCTCTCTCTCTGTCATTTTCATTTCTTTCCCTCACCTTCTCACCTAACATTGGCTTTTCATCCTTATGGCTCCTTCTTCAGATGTCAACCATCTTTCTCATCCTTGCATATATGTTTCGGAATTTACTTTGGATATGGTTCCACAAAAGGGATTATGTTTCTTCTCGCTCGGAGAGAAAGTCTGGTTTCATGAAATGGCTTAGTAAGCTTTTCAAAGGCGGGTCCAATAGAGGAAGAGGTGGTCGTCATCTGCATGACCCAGCAGAGGAAAGCATGGTTTGGGGTGCTCCATCTAGAGCCTTGGATGATCGTGCTAGAGCTCAGAAGGAGAAAGAGGATCTTGGTCATGCAATGTCACTTTCTTCAGCCGATGATTTAAAGAGACCAAACGCCCATCGAGGATATAGTTGGGGAGAAGATCCTGGTGATGATTACTCAAAGGCACTTCAGGATACCCTTAACTCATCAGCACACCCTCCATTTGCCCCTACACCATTTTATCCCCACGAATATAGTTTGCCATTGAACAGAAGAATATGTGGTGGCTGCAACCAAGAGATTATGTATGGAAATTGTTTGGGCTGCATGGATACTTACTTTCATCCAAACTGCTTTCGCTGTCACTCTTGCCGTTACCCCATTACAGAGCGTGAGTTTTCCTTGTCAGGGAAGCATCCATATCACAAGTCCTGTTTTAAAGAGTTGACTCACCCAAAATGTGAAGTTTGCTTCCAATTTATTCCTATAAATGCTGCTGGTTTGATTGAGTATAGGTGCCACCCCTTTTGGTCCCAAAAGTATTGTCCATCTCATGAATATGATAATACAGCTCGCTGCTGTAGTTGTGAAAGATTGGAGCCTCGGAACATAAAATACTATAGACTAGAAGATGGACGGAGTTTGTGTTTAGAGTGCATGGAATCTGCTATAACGGATACTGGTGACTGCCAGCCCCTTTACCATTCTATCAGAGATTACTACGAAGGAATGCAGATGAGAATAGATCAGCAAATTCCCATGCTTCTCGTTGAGAGAGAAGCACTTAATGAAGCTATTGAAGGGGAAAAGAATGGTTTTCACCACTTACCAGAAACAAGGGGCTTATGCCTTTCAGAAGAGCAGACTGTCACCAGTATACATAGAAGACCAAGAATTGGAGGGCATCGACTAATAGGGATGAGAACTCAACCTCAAAAACTGACTAGAAAATGTGAAGTTACAGCAATTCTTGTTCTATATGGTCTTCCTAGGTTACTCACAGGTGCTATACTTGCCCATGAGTTGATGCATGGCTGGCTACGCCTTAAAGGTTACCGCAACCTTAATCCTGAAGTAGAGGAAGGCATTTGTCAGGTTCTTTCGTATATGTGGCTTGAGTCAGAAGTAATGCCAAGCGTTCAAAGCATGCCATCAACGTCCACAGCTGCTTCTTCTTCCTCCTCCTCCTCAAAGAAAGGTGCAAAGTCTCAAGTTGAAAATAAATTGGGCGAATTTTTCAAGAATCAGATTGCCAATGATTCTTCCCCAGCTTATGGTGGTGGCTTTAGAGCTGCTAATGAAGCTGTTAATAAATATGGGTTGCGTTCTACACTTGAGCATATTCGTTTCACTGGTGTTTTCCCATTGTAA 1791 0.4294 MDSKLIPSSPTSQPIFLPFSSLLSKPRISLIPLFLSFSTTINSLLQCPFFSIFLSLSLSFSFLSLTFSPNIGFSSLWLLLQMSTIFLILAYMFRNLLWIWFHKRDYVSSRSERKSGFMKWLSKLFKGGSNRGRGGRHLHDPAEESMVWGAPSRALDDRARAQKEKEDLGHAMSLSSADDLKRPNAHRGYSWGEDPGDDYSKALQDTLNSSAHPPFAPTPFYPHEYSLPLNRRICGGCNQEIMYGNCLGCMDTYFHPNCFRCHSCRYPITEREFSLSGKHPYHKSCFKELTHPKCEVCFQFIPINAAGLIEYRCHPFWSQKYCPSHEYDNTARCCSCERLEPRNIKYYRLEDGRSLCLECMESAITDTGDCQPLYHSIRDYYEGMQMRIDQQIPMLLVEREALNEAIEGEKNGFHHLPETRGLCLSEEQTVTSIHRRPRIGGHRLIGMRTQPQKLTRKCEVTAILVLYGLPRLLTGAILAHELMHGWLRLKGYRNLNPEVEEGICQVLSYMWLESEVMPSVQSMPSTSTAASSSSSSSKKGAKSQVENKLGEFFKNQIANDSSPAYGGGFRAANEAVNKYGLRSTLEHIRFTGVFPL 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1209g00009 596 ProSitePatterns LIM zinc-binding domain signature. 234 268 IPR001781 -
Mupr1209g00009 596 MobiDBLite consensus disorder prediction 522 541 - -
Mupr1209g00009 596 SMART lim_4 233 285 IPR001781 -
Mupr1209g00009 596 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 228 259 - -
Mupr1209g00009 596 CDD LIM_DA1 234 286 - -
Mupr1209g00009 596 PANTHER PROTEIN DA1-RELATED 2 118 595 IPR045218 -
Mupr1209g00009 596 ProSiteProfiles LIM domain profile. 232 292 IPR001781 -
Mupr1209g00009 596 Pfam Protein DA1 383 590 IPR022087 -
Mupr1209g00009 596 FunFam Protein DA1-related 2 221 287 - -
Mupr1209g00009 596 Gene3D Cysteine Rich Protein 229 293 - -
Mupr1209g00009 596 Pfam LIM domain 234 287 IPR001781 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1209g00009 Mupr-Chr1209 82764 87947 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mupr1209g00009 DA1-like 9.1e-101 CL0126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1209g00009 - - gmx:100784976 951.429