Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1208g00001 ATGGATTTTAGTTTAGTGAAGAAGGCCCATAATAGGCTTATCAGGCCAGCATGTTTGAGGCCCAAAACACTTGTTGGATCCGATCTAATACAGGACCCAATACATAACCCATATTCCTTAACCTTCACTTCTCTCTCAAATCGTCCATTCTGCTACACTCTTACAATCCTCTGCAAAATGAAGGTAATCGCCGCCTATTTGCTCGCCGTCTTGGGAGGCAACGCAGCCCCTTCCGCCGATGACTTAAGGGACATCCTTGGCTCCGTTGGAGCAGATGCCAATGACAACAACATCAGCAATTTTCTGTCTGAAGTGAAGGGAAAAGATATTACAGAGCTTATTGCCTCCGGTAGGGAAAAGTTGGCCTCAGTGCCTTCTGGCGGTGGCGGCGCCGTTGCCGTGGCCGCTTCTCCCGGGGGTGGCGGTGCTGCTGCTGCCCCTGCCGCCGAATCAAAGAAAGAGGAAAAGGAGGAAGAGAAGGAAGAATCGGATGACAAAACCGATTCCAAAACAGTTAGGCTCGTTAGTTCGGACTTTTTCACG 543 0.4991 MDFSLVKKAHNRLIRPACLRPKTLVGSDLIQDPIHNPYSLTFTSLSNRPFCYTLTILCKMKVIAAYLLAVLGGNAAPSADDLRDILGSVGADANDNNISNFLSEVKGKDITELIASGREKLASVPSGGGGAVAVAASPGGGGAAAAPAAESKKEEKEEEKEESDDKTDSKTVRLVSSDFFT 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1208g00001 181 Coils Coil 146 169 - -
Mupr1208g00001 181 CDD Ribosomal_P2 60 126 IPR044076 GO:0002182|GO:0003735|GO:0022625
Mupr1208g00001 181 Hamap 50S ribosomal protein L12 [rpl12]. 61 165 IPR027534 GO:0003735|GO:0005840|GO:0006414
Mupr1208g00001 181 Gene3D - 59 117 IPR038716 -
Mupr1208g00001 181 MobiDBLite consensus disorder prediction 149 172 - -
Mupr1208g00001 181 Pfam 60s Acidic ribosomal protein 77 166 - -
Mupr1208g00001 181 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 60 167 IPR044076 GO:0002182|GO:0003735|GO:0022625
Mupr1208g00001 181 MobiDBLite consensus disorder prediction 135 181 - -
Mupr1208g00001 181 FunFam 60S acidic ribosomal protein P2 58 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1208g00001 Mupr-Chr1208 3213 4097 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1208g00001 60 132 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 72.603 7.75e-29 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1208g00001 K02943 - gmx:100817491 116.701