Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12089g00001 TTGGACATCAAGTTTAAGATAGTAGCAAGAGGTGAAAAAATTGGCTTGCAACATTTTTTGCCCATAAGGCCGTTGGGTTGTGGAGATACTGGCAGTGTTCATTTGGTGGAACTCAAAGGTACTGGTGAACTATATGCAATGAAGGCAATGGAAAAGTCTGTAATGCTAAATCGTAATAAGGTTCACCGGTCATGCATTGAGAGAGAGATTATATCATTATTGGATCATCCTTTTCTTCCAACACTATACACCTCATTTCAGACTTCTACACATGTATGTTTGATTACTGACTTTTGCCATGGGGGAGAGTTGTTTGCATTGCTTGACAAGCAACCAATGAAGATTTTCAAAGAAGAATTAGCAAGATTCTATGCAGCAGAGGTTGTCATTGGTTTGGAATATCTCCATTGTTTAGGTATAATTTATCGTGACTTAAAGCCTGAAAATATCTTACTTCAGAAGGATGGTCATCTTGTGTTAACTGATTTTGATCTATCATTTATGACATCTTGTAAACCCCAGGTTGTGAAGCAATCATTACCTGGTAAGAGAAGATCGCGAAGTCAACCACCACCAATATTTGTTGCAGAGCCAGTTACACAATCAAACTCATTTGTTGGAACTGAAGAATACATTGCCCCAGAAATTATAACCGGAGCTGGGCATACTAGCGCTATAGATTGGTGGACCCTTGGTATTTTGTTGTATGAGATGCTCTATGGTCGTACACCATTTAGAGGAAAGAATAGACAGAAGACATTTTCCAACATTTTACACAAGGATCTTACCTTTCCAAGCAGCATCCCGGCTAGTCTTGCAGCCAGGCAGTTGATTAATGCACTATTGCAAAGAGACCCAACCAGTCGTTTAGGTTCAACCACTGGTGCCAATGAAATCAAACAACATCCTTTTTTCCGTGGAATCAATTGGCCTCTAATCCGTAACATGACTCCACCCCCATTAGATGTTCCTCTTCAGTTGATAGGAAAAGATCCAATGGCAAAGGATTTGAAGTGGGAAGATGATGGGGTGCTAGGG 1038 0.4027 LDIKFKIVARGEKIGLQHFLPIRPLGCGDTGSVHLVELKGTGELYAMKAMEKSVMLNRNKVHRSCIEREIISLLDHPFLPTLYTSFQTSTHVCLITDFCHGGELFALLDKQPMKIFKEELARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHLVLTDFDLSFMTSCKPQVVKQSLPGKRRSRSQPPPIFVAEPVTQSNSFVGTEEYIAPEIITGAGHTSAIDWWTLGILLYEMLYGRTPFRGKNRQKTFSNILHKDLTFPSSIPASLAARQLINALLQRDPTSRLGSTTGANEIKQHPFFRGINWPLIRNMTPPPLDVPLQLIGKDPMAKDLKWEDDGVLG 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12089g00001 346 Pfam Protein kinase domain 22 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12089g00001 346 ProSiteProfiles Protein kinase domain profile. 19 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12089g00001 346 CDD STKc_phototropin_like 17 328 - -
Mupr12089g00001 346 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Mupr12089g00001 346 Gene3D Phosphorylase Kinase; domain 1 18 102 - -
Mupr12089g00001 346 FunFam LOV domain-containing protein 18 102 - -
Mupr12089g00001 346 Gene3D Transferase(Phosphotransferase) domain 1 103 320 - -
Mupr12089g00001 346 SMART serkin_6 19 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12089g00001 346 PANTHER FLIPPASE KINASE 1-RELATED 8 321 - -
Mupr12089g00001 346 FunFam Putative LOV domain-containing protein 103 317 - -
Mupr12089g00001 346 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Mupr12089g00001 346 SUPERFAMILY Protein kinase-like (PK-like) 13 330 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12089g00001 Mupr-Chr12089 969 15481 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12089g00001 6 345 AGC Kinase Gene Family AT5G58140 83.578 0.0 606
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mupr12089g00001 Pkinase 2.5e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12089g00001 K20715 - gmx:100820096 661.759