Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12085g00002 ATGCCTGAGAGAGGGAAAGAGAATAAAAACATAAAGACACGACCATCGTGGTTGGTGGACAAAAGTAGAATTGCAACCAAAATAAAGTGTGCCTCTGGACCATGTGGAAAAGTTATATGGAAAAGCAATCCTACCCGAGCTTGCCCAAATTGTGAACATGTTATTGACAACAGTGATGTAGCACAAGAGTGGCCTGGACTACCTAAAGGCGTTAAATTTGATCCATCTGATCAAGAGATAATATGGCACTTGCTTGCTAAAGTTGGTGCAGGAAATTCAAAACCTCACCCTTTCATTGATGAATTTATTACTACTCTGGAAGTGGATGATGGGATTTGTTATACTCACCCTCAACACTTACCAGGTGTCAAGCAAGATGGAAGTGCTTCTCACTTTTTCCACAGAGCAATCAAGGCTTATAATACTGGCAGTCGAAAGCGTCGAAAAATATGTGGTCAGGATTTTGGTGATGTTCGCTGGCACAAGACTGGAAGGACTAAACCTGTCATGTTGAATGGGCTTCAAAAAGGCTGTAAAAAGATTATGGTTCTGTATATAAGCCTGGTGAGAGGAGGAAAATCTGAGAAAACTAATTGGGTTATGCATCAATATCATCTAGGAACTGAAGAGGATGAGAAGGATGGAGAGTATGTTATCTCTAAAGTGTTTTACCAGCAGCAGCAAGTCAAATTTGGTGAAAAAGATGACAAGGATATTCCTGAAATCACTGAAGCAATTATATTGAAAGTGGATCCAGTCACTCCCAAATCTGTGACTCCTGAACCTCCTCGCATTGAAAAGCGATGTTCAAATTTAGACCTAGGACAAGAATCATGTCACATTCCTCAGCATCCTCAGATAGGTTGTGTAGATGACCTTCAGGCTGATTGTGAAGATCTTGCAAAAGATGATCTATTGATGGTAGAGACTCAAAAAAATAATGAAGGGATAGATAATATAGAAAACAATGCCGAGGAAGACTCAAAATGGTGGGATAGTGAGTCGCAGAATCTGTTGAGTTCACAACAACTTGTTGAAGCATTGTTCTTGTGTGATGATCTCCTTCAAAGCCAGTCTCCCAATAGGGATGGGGAAAATGAATACAAAAAACGACCCAGTCTTTCTGTTTATGCTCATCTAGGACCAGAGCATCTGAAGAAAGATATTGAAGAGTGCCAAAATCTTGTCCTTGACACTGCAAATGTAGATCCTGAGACACCACCTTCAGAATTTCGACTTAGTCAGCTGGATTTTGGTTCACAGGATAGCATTGTTTCCTGGGGTGGCAGCAAAGCAATCGACTAA 1305 0.4069 MPERGKENKNIKTRPSWLVDKSRIATKIKCASGPCGKVIWKSNPTRACPNCEHVIDNSDVAQEWPGLPKGVKFDPSDQEIIWHLLAKVGAGNSKPHPFIDEFITTLEVDDGICYTHPQHLPGVKQDGSASHFFHRAIKAYNTGSRKRRKICGQDFGDVRWHKTGRTKPVMLNGLQKGCKKIMVLYISLVRGGKSEKTNWVMHQYHLGTEEDEKDGEYVISKVFYQQQQVKFGEKDDKDIPEITEAIILKVDPVTPKSVTPEPPRIEKRCSNLDLGQESCHIPQHPQIGCVDDLQADCEDLAKDDLLMVETQKNNEGIDNIENNAEEDSKWWDSESQNLLSSQQLVEALFLCDDLLQSQSPNRDGENEYKKRPSLSVYAHLGPEHLKKDIEECQNLVLDTANVDPETPPSEFRLSQLDFGSQDSIVSWGGSKAID 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12085g00002 434 Gene3D NAC domain 76 230 IPR036093 GO:0003677|GO:0006355
Mupr12085g00002 434 SUPERFAMILY NAC domain 52 225 IPR036093 GO:0003677|GO:0006355
Mupr12085g00002 434 ProSiteProfiles NAC domain profile. 67 225 IPR003441 GO:0003677|GO:0006355
Mupr12085g00002 434 FunFam NAC domain-containing protein 8 76 229 - -
Mupr12085g00002 434 Pfam No apical meristem (NAM) protein 68 206 IPR003441 GO:0003677|GO:0006355
Mupr12085g00002 434 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 16 393 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12085g00002 Mupr-Chr12085 13180 17487 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12085g00002 30 237 NAC Transcription Factor Family AT1G28470 53.271 5.81e-72 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr12085g00002 NAM 1.3e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12085g00002 - - gmx:100787702 780.4