Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12084g00006 ATGGGAGTTCCAGAGAGAGACCCTCTTGCACAATTGAGTTTGCCTCCTGGGTTTAGGTTTTTCCCCACCGATGAGGAGCTTCTGGTTCAGTACCTTTGTCGCAAGGTTGCTGGCCACCATTTTTCTCTTCCGATCATTGCTGATGTTGATTTGTACAAATTCGACCCTTGGGTTCTTCCAGATAAGGCTATGTTTGGTGAGAAAGAGTGGTACTTCTTCAGTCCGAGAGACAGGAAGTACCCGAATGGTTCACGACCAAACAGAGTGGCGGGTTCTGGATATTGGAAAGCCACAGGAACTGACAAAGTTATCACCACCGAAGGGAGAAAAGTTGGCATAAAAAAAGCACTTGTTTTCTACATTGGCAAAGCACCCAAAGGCTCCAAAACCAATTGGATCATGCACGAGTATCGCCTTCTCGACTCTTCGCGCAAAAACAACCTCGGCACCGCAAAGCTTGATGATTGGGTTTTGTGTCGTATATACAAGAAGAACTCAAGTTCACAAAAGGTTGAGCCAAATCTTTGGGCCAAAGAATGTAGCAATGGATCATCACCTTCTTCATCGTCCCACGTGGACGACATGCTCGAATCGTTCCCGGAGATTGATGACCGGTGCTTCACCTTGCCGCGCGTGAACTCTGTCAGAACAATGCAACAACAAGAAGAGAAATTTGGGTTTCAGAATATGGGAACTGGGTTTTTTGCGGATTGGGTTAATCCGGCGGATCTTGATTCGGTCTCTGAATTCGGGTCGGGTTGCCAATCACAAGGGATGATGAATTATAATGACATATTTGTCCCTTCGGTGCCGACGTTTGGCCACTTGGACTTCATGGTGGCTGCACCTACTGAGGAGGAGGTTCAGAGCGGTGTTAGAACCCAAGTTGAGCAGAATCCAAATGCCCGGCCGTTGTCGGGCTTGGACGACCCGTTTGGGTTTGGTTACTTGGGTCAAGTTGGATACGGGTTTCGAAATTGA 981 0.4781 MGVPERDPLAQLSLPPGFRFFPTDEELLVQYLCRKVAGHHFSLPIIADVDLYKFDPWVLPDKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVITTEGRKVGIKKALVFYIGKAPKGSKTNWIMHEYRLLDSSRKNNLGTAKLDDWVLCRIYKKNSSSQKVEPNLWAKECSNGSSPSSSSHVDDMLESFPEIDDRCFTLPRVNSVRTMQQQEEKFGFQNMGTGFFADWVNPADLDSVSEFGSGCQSQGMMNYNDIFVPSVPTFGHLDFMVAAPTEEEVQSGVRTQVEQNPNARPLSGLDDPFGFGYLGQVGYGFRN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12084g00006 326 FunFam NAC domain-containing protein 72-like 23 169 - -
Mupr12084g00006 326 Gene3D NAC domain 23 170 IPR036093 GO:0003677|GO:0006355
Mupr12084g00006 326 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Mupr12084g00006 326 SUPERFAMILY NAC domain 10 165 IPR036093 GO:0003677|GO:0006355
Mupr12084g00006 326 ProSiteProfiles NAC domain profile. 14 164 IPR003441 GO:0003677|GO:0006355
Mupr12084g00006 326 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12084g00006 Mupr-Chr12084 12914 14271 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12084g00006 1 318 NAC Transcription Factor Family AT4G27410 56.932 1.70e-116 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr12084g00006 NAM 8.4e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12084g00006 - - gmx:100811301 579.326