Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12083g00001 ATGAAAATTCACAATACTGGAAAACAGGTTAATGTGTCTGGCACCATAGCCTATGTTTCTCAAACTTCTTGGATACAAAGTGGGACAGTTCAAGATAATATACTCTTTGGCAAGCCAATGGACAAAACAAGATATGAAAATGCCATTGAAGTTTGTGCTTTGGATAAGGATATTAATGATTTTAGCCATGGTGATCTTACAGAAATAGGTCAGCGAGGGATTAACATGAGTGGAGGACAAAAGCAAAGGATTCAACTAGCTCGTGCAGTCTACAATGATGCTGATATATATCTCCTCGATGACCCTTTCAGCGCAGTTGATGCTCACACTGCTGCAATTCTGTTCAATGACTGTGTAATGACTGCTCTAAGAGAGAAAACAGTCATTCTAGTGACTCATCAAGTGGAGTTTCTCTCACAAGTTGATACAATCCTGGTAATGGAAGATGGAGAAGTTACTCAATCAGGTAATTATGAGAATCTGTTCAAAGCTGGAACAGCCTTTGAACAACTTGTGAGCGCTCATAAAGAAGCAATTGCAGAGTTGGATCAAAATGGTGAAGACAAAACTCATACAGAAGAGTCTCAAGGTTTTTATCTCACTCAAAATCAAAGTGAGGGGGAAATTTCTATGGAGGGTCAACTTGTGGAACAGCTTACCCAAGAAGAAGAAAAAGTGATTGGTGATGTTGACTGGAAGACATTCTGGGATTATATTTCGTTTTCCAGGGGTTCATTGATGCTGTGTTGGATCATATTGGCACAATTTGCTTTTGCTGCTTTGCAGGCTGCTTCAACGTTTTGGCTTGCTCTAGCCATTGAAATTCCAAAATTAACTAGTGTCACCTTGATTGGAGTTTACTCATTAATTTCATTTACTGGTACTGCATTTGTGTATCTAAGGTCTCTCTTTACTGCTCACCTAGGATTAAATGCTTCTGCAGCATTCTTCACAAGTTTCACTACTGCTATCTTCAATGCTCCTATGCTCTTCTTTGACTCAACCCCTGTAGGAAGGATTTTAACCCGGGCTTCATCAGATTTTAGTATTTTGGACTTGGATATACCTTTTTACATCATCTCTGTAGCATCTCTAGCAATTGAAAATATGGTGATAATATGTATAATGGTTTCAGTAACATGGCAAGTTCTCGTTGTTTTCATTCCTGCAATAGTTGCATCAAAATATGTTCAGGGATATTATCAAGCCTCGGCTAGGGAATTAATGAGGATCAATGGAACCACAAAAGCTCCTGTCATGAATTTTGCAGCCGAGACATCACTTGGTGTGGTTACTGTAAGAGCATTTAACATGGCTGACAGATTTTTTAAAAATTACTTAAAGCTTGTGGACACAGATGCAAAACTGTTCTTTCATTCTAATGTGGCCATGGAGTGGTTAGTTTTAAGGATTGAAGCACTCCAAAATTTGACAGTCATCACTGCAGCTTTGTTCCTTATTATACTTCCTGGTAGATATGTGTCTCCAGGCCTTGTGGGACTGTCTCTCTCTTATGCCTTCAACTTGACAGCATCCATAATAGTTTGGACTCGATATTATTGCAACTTATTAAACTATATTATCTCTGTTGAAAGAATCAAGCAATTCATTCACCTACCGGCGGAGCCTCCTGCCATTGTGGAGGACAACCGGCCTCCATCTTCATGGCCTTCCAAAGGCAGGATTGACCTTCAAGCATTAGAGATTAGATATCGTCCTAATGCTCCATTGGTCCTTAAGGGTATCACTTGTACGTTTAAAGAAGGGAGTAGAGTGGGAGTTGTAGGTAGAACTGGAAGTGGAAAAAGTACACTTATAAGTGCTTTGTTTCGCTTAGTTGAACCAGAAAGAGGTGATATTCTTATAGATGGGATTAACATATGCTCAATGGGGTTGAAGGATTTGAGGACGAAACTAAGCATCATCCCTCAAGAACCAACTCTTTTCAAGGGAAGCATTAGAACCAACTTGGATCCTCTAGGCCTCTACTCAGATGATGATATATGGAAGGCTTTAGAGAAATGTCAGCTTAAGGAAACTATCTGCTGTCTACCAAATCTTTTGGACTCTTCTGTGAGTGATGAAGGTGGAAATTGGAGCTTGGGACAGCGGCAACTGTTTTGTCTTGGAAGAGTACTACTTAAGAGGAATAGAATTCTTGTTCTGGATGAAGCTACGGCCTCCATTGACTCTGCCACAGATGCCATTTTACAAGGAATAGTTAGAGAAGAATTTGCAGAATGCACAGTTATAACTGTGGCTCACAGGGTTCCAACTGTAATAGATAGTGACATGGTTATGGTATTGTCGTATGGGGAACTTGTGGAATATGATGAGCCTTCAAGACTAATGGACACCAACTCTTCATTCTCTAAGTTGGTAGCTGAATATTGGTCCAGCTGCAGGAAGAATTCCTCTTAA 2421 0.3994 MKIHNTGKQVNVSGTIAYVSQTSWIQSGTVQDNILFGKPMDKTRYENAIEVCALDKDINDFSHGDLTEIGQRGINMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFNDCVMTALREKTVILVTHQVEFLSQVDTILVMEDGEVTQSGNYENLFKAGTAFEQLVSAHKEAIAELDQNGEDKTHTEESQGFYLTQNQSEGEISMEGQLVEQLTQEEEKVIGDVDWKTFWDYISFSRGSLMLCWIILAQFAFAALQAASTFWLALAIEIPKLTSVTLIGVYSLISFTGTAFVYLRSLFTAHLGLNASAAFFTSFTTAIFNAPMLFFDSTPVGRILTRASSDFSILDLDIPFYIISVASLAIENMVIICIMVSVTWQVLVVFIPAIVASKYVQGYYQASARELMRINGTTKAPVMNFAAETSLGVVTVRAFNMADRFFKNYLKLVDTDAKLFFHSNVAMEWLVLRIEALQNLTVITAALFLIILPGRYVSPGLVGLSLSYAFNLTASIIVWTRYYCNLLNYIISVERIKQFIHLPAEPPAIVEDNRPPSSWPSKGRIDLQALEIRYRPNAPLVLKGITCTFKEGSRVGVVGRTGSGKSTLISALFRLVEPERGDILIDGINICSMGLKDLRTKLSIIPQEPTLFKGSIRTNLDPLGLYSDDDIWKALEKCQLKETICCLPNLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQGIVREEFAECTVITVAHRVPTVIDSDMVMVLSYGELVEYDEPSRLMDTNSSFSKLVAEYWSSCRKNSS 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12083g00001 806 Pfam ABC transporter transmembrane region 280 503 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr12083g00001 806 SMART AAA_5 588 773 IPR003593 GO:0016887
Mupr12083g00001 806 SUPERFAMILY ABC transporter transmembrane region 235 544 IPR036640 GO:0005524|GO:0016020
Mupr12083g00001 806 CDD ABCC_MRP_domain1 3 151 - -
Mupr12083g00001 806 Gene3D ABC transporter type 1, transmembrane domain 212 543 IPR036640 GO:0005524|GO:0016020
Mupr12083g00001 806 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 13 798 - -
Mupr12083g00001 806 Pfam ABC transporter 579 727 IPR003439 GO:0005524
Mupr12083g00001 806 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 552 795 IPR027417 -
Mupr12083g00001 806 CDD ABCC_MRP_domain2 560 780 - -
Mupr12083g00001 806 CDD ABC_6TM_ABCC_D2 266 537 IPR044726 GO:0140359
Mupr12083g00001 806 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 173 IPR027417 -
Mupr12083g00001 806 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 250 513 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr12083g00001 806 Gene3D - 2 201 IPR027417 -
Mupr12083g00001 806 Pfam ABC transporter 12 103 IPR003439 GO:0005524
Mupr12083g00001 806 FunFam Multidrug resistance-associated protein 4 2 191 - -
Mupr12083g00001 806 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 174 IPR003439 GO:0005524
Mupr12083g00001 806 FunFam ABC transporter C family member 3 545 796 - -
Mupr12083g00001 806 Gene3D - 545 796 IPR027417 -
Mupr12083g00001 806 FunFam ABC transporter C family member 5 212 543 - -
Mupr12083g00001 806 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 564 796 IPR003439 GO:0005524
Mupr12083g00001 806 ProSitePatterns ABC transporters family signature. 76 90 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12083g00001 Mupr-Chr12083 2516 8388 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12083g00001 560 794 Calmodulin-binding Proteins AT2G36910 31.535 2.81e-29 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12083g00001 - - gmx:100784827 1355.5