Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12080g00001 ATGCCTAGCAAGCTTATAGTGGCAGCTTACAAGCCTTCTCTGCGCACACGTTGCCGGTTTGCATGTACGTTGCCGCTTCTCATGGAGAGGAAAACAACTGGATTTTTGTTCTTGCTCCTCCTTCTCTTAGCCGCTGATGTGGCGGTGAAGACAGCAGAGGCGAGATATTGCTTTACACAGAGCCACCGGTTCGGGGGTTTATGCTTAAGCTACAGAAACTGTGGACATGTATGCAAGACCGAAGGTTTCTCCGGTGGCGAATGCAGAGGCTTCCGTCGCCGCTGCTTTTGCACCAAGATTTGTTGA 306 0.5098 MPSKLIVAAYKPSLRTRCRFACTLPLLMERKTTGFLFLLLLLLAADVAVKTAEARYCFTQSHRFGGLCLSYRNCGHVCKTEGFSGGECRGFRRRCFCTKIC 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12080g00001 101 Gene3D - 55 101 IPR036574 -
Mupr12080g00001 101 ProSitePatterns Gamma-thionins family signature. 55 78 IPR008176 GO:0006952
Mupr12080g00001 101 SMART gth_4 56 101 IPR003614 GO:0006952
Mupr12080g00001 101 PRINTS Purothionin signature 86 100 IPR008176 GO:0006952
Mupr12080g00001 101 PRINTS Purothionin signature 56 71 IPR008176 GO:0006952
Mupr12080g00001 101 Pfam Gamma-thionin family 55 101 - -
Mupr12080g00001 101 SUPERFAMILY Scorpion toxin-like 55 101 IPR036574 -
Mupr12080g00001 101 CDD Knot1 66 98 IPR003614 GO:0006952
Mupr12080g00001 101 PANTHER DEFENSIN-LIKE PROTEIN 1 33 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12080g00001 Mupr-Chr12080 587 1197 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12080g00001 30 101 Plant Defensins Gene Families AT2G02120 52.778 1.25e-22 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12080g00001 - - jre:108983841 82.8037