Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1207g00001 ATGTCCAAGCCAGTGCTAGGCATAGGGGATGAGGAGGGTCAAAGCAATGTCACTTTGTTGGTTTCTTCCTCAGCCACCATGGAAAGTGTGTGCCTGAATAGCTCAAAATTGAAAGAGCGCAACTACATGGGGTTATCTGATTGTTCATCGGTGGACAGCTCTGCGCCGTCCTTCTCAGATGAGAGTAAAAGCAATCTGAATCTTAAAGCCACTGAGCTCAGGCTGGGGCTTCCAGGATCGCAGTCTCCCTTGCGAGATTCAGATCTTTGCTTGAGAAGTTCAATTCAGTTTGATGAAAAGCCACTGTTTCCTTTACATCCTGCAACTGATGATCACCATTCCTCATCAAAGCCTGCTGTTTTGGGTAACAAAAGAGGGTTCTCAGATGTCATAAGTGGATTCTCAGAGGGGAAATTGCTTGTTAGTTCTGAGGCCAACACAATGTTGTCACCGAGGCCTTCTCCTAATGTGGCATTGAAACCAAGCTCTATGCTTGAGAATGTTGGGGCTCAGCAAGCCAAAGCCAAAGAACTCACAACAGCAAAGGTTGGTCTTGAGAGGTCTCATGCTGTCAATGAAAGCAGGCCTAATCTTAATGGTTCTGCAAATAACAATAGCAGTGCACCGGCTACCAAGGCACAGGTGGTTGGTTGGCCTCCTATAAGATCATTCAGGAAAAACTCATTGGCCACTGCTTCAAAGAACATTGAAGAAGTAGATGGAAAAGCTGGGTCTGTTGGTCCATTGTTCGTGAAGGTCAGCATGGATGGTGCTCCCTACTTAAGAAAAGTAGACTTGAAGAATTACTCTGCCTATACCGAACTATCTTCTGCTCTGGAGAATATGTTCAGCTGTTTTACCATAGGTCCTTGTGGATCTCATGGAAATCTGGGAGGGGAGATGCTGAAGGATCTGCTTCATGGGTCAGAATATGTTCTTACATATGAGGATAAAGACGGTGACTGGATGCTAGTGGGTGATGTTCCCTGGGAGATGTTTATTGATACGTGCAGGAGGCTAAGGATCATGAAGAGCTCCGATGCCATTGGTCTAGCACCAAGAGCTCTTGAAAAGAGTAAGAGCAGGGCCTAG 1092 0.4606 MSKPVLGIGDEEGQSNVTLLVSSSATMESVCLNSSKLKERNYMGLSDCSSVDSSAPSFSDESKSNLNLKATELRLGLPGSQSPLRDSDLCLRSSIQFDEKPLFPLHPATDDHHSSSKPAVLGNKRGFSDVISGFSEGKLLVSSEANTMLSPRPSPNVALKPSSMLENVGAQQAKAKELTTAKVGLERSHAVNESRPNLNGSANNNSSAPATKAQVVGWPPIRSFRKNSLATASKNIEEVDGKAGSVGPLFVKVSMDGAPYLRKVDLKNYSAYTELSSALENMFSCFTIGPCGSHGNLGGEMLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCRRLRIMKSSDAIGLAPRALEKSKSRA 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1207g00001 363 MobiDBLite consensus disorder prediction 192 212 - -
Mupr1207g00001 363 Pfam AUX/IAA family 71 354 IPR033389 -
Mupr1207g00001 363 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 66 350 IPR003311 GO:0005634|GO:0006355
Mupr1207g00001 363 MobiDBLite consensus disorder prediction 187 212 - -
Mupr1207g00001 363 ProSiteProfiles PB1 domain profile. 248 345 IPR000270 GO:0005515
Mupr1207g00001 363 Gene3D - 244 356 - -
Mupr1207g00001 363 FunFam Auxin-responsive protein 243 355 - -
Mupr1207g00001 363 SUPERFAMILY CAD & PB1 domains 248 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1207g00001 Mupr-Chr1207 10714 14321 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1207g00001 237 353 B3 DNA Binding Superfamily AT4G23980 29.915 4.86e-09 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mupr1207g00001 AUX_IAA 9e-85 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1207g00001 K14484 - gmx:100815447 620.928