Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12074g00002 ATGGATTCTCAGGAACCACCTCAGCAGCAACCGCTAAACATGATGGTGGGACCCACCTCGTACCCTTCGATGATGGCCCCCGCCACCGCCCGATTCCCTTTCAACAACAACCCTCCTCCCGAGCCTTTCAACGACAACGACGCCAACAATATCAACAACACGTGCGAGGCCTTGAAACCGTGCGGGCTTGCCTCCGAGTCCGCCAAGAAAAAGAGGGGCCGGCCCAGAAAGTACTCGCCCGATGGTAACATCGCTTTGGGCCTGGCCCCAACCAACGCTTCTTCTTCCTCCGCCGAACCCACCAAGAAGCATCGCGGTCGCCCCCCTGGCTCCGGGAAGAAGCAGATGGACGCTCTCGGAATTGGCGGAACTGGTTTTACTCCTCATGTTATCTTAGCCGAATCTGGCGAGGATATTGCTGCAAAACTTATGTCCTTCTGTCAACAAGGACCTCGGACTGTTTGCATTCTTTCTGCTAGTGGTGCAATCTGCAATGTCACCATTCGACAGCCTGCGATATCTGGGGCCGGCGCCGGGGGTACTGTCTCATACGAGGCACCAAGTTTAGCTGCATCTTTACTTTTTAATTCACTTCACATGATGTCTTTCTCATTGCAGGGTCGATTTGAGATTATATCACTTTCAGGTTCTATGCAACAATATGAAAATAATAGTGGTCATAACAGAATGAGTGGCTTGAGTGTGACTCTAGCAGGTTCTGATGGACGAGTATTAGGTGGTGAAGTTTCTGGAGCCCTTACTGCAGCATCCCCAGTGCAGGTCATTGTGGGTAGCTTTATTACAGATGGCAAGAAGTCTAGCTCAAGTAAATCTGTACCTTCTTCGACACCATCATCCCAAATGTTAACTTTTGGTGCTCCTACAACTCCAACCACTCCTCCTACCTCTCAAGGGCCTTCAACCGAGTCCTCCGATGAGAATGAGAATAGTCATTTTAGTAAGGGGCCAGGAGGCCCAGGACTCTACAATAATGCTAGTCAACAGCCCATTCATACCATGCCCATGTACCATCATCAACTATGGGCTGGCCAAACTCAGCAGGAAGTTGGGACGATGGGACCAAGAAAAGGAAGAGTGAATGGGAGCATTCAGACGGAGAACGTTGCATTTCTAAGTTGGAAGCCTACCTGA 1152 0.5043 MDSQEPPQQQPLNMMVGPTSYPSMMAPATARFPFNNNPPPEPFNDNDANNINNTCEALKPCGLASESAKKKRGRPRKYSPDGNIALGLAPTNASSSSAEPTKKHRGRPPGSGKKQMDALGIGGTGFTPHVILAESGEDIAAKLMSFCQQGPRTVCILSASGAICNVTIRQPAISGAGAGGTVSYEAPSLAASLLFNSLHMMSFSLQGRFEIISLSGSMQQYENNSGHNRMSGLSVTLAGSDGRVLGGEVSGALTAASPVQVIVGSFITDGKKSSSSKSVPSSTPSSQMLTFGAPTTPTTPPTSQGPSTESSDENENSHFSKGPGGPGLYNNASQQPIHTMPMYHHQLWAGQTQQEVGTMGPRKGRVNGSIQTENVAFLSWKPT 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12074g00002 383 MobiDBLite consensus disorder prediction 1 20 - -
Mupr12074g00002 383 MobiDBLite consensus disorder prediction 269 334 - -
Mupr12074g00002 383 MobiDBLite consensus disorder prediction 1 17 - -
Mupr12074g00002 383 Pfam Plants and Prokaryotes Conserved (PCC) domain 128 266 IPR005175 -
Mupr12074g00002 383 CDD DUF296 127 266 IPR005175 -
Mupr12074g00002 383 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 20 317 IPR039605 GO:0003680
Mupr12074g00002 383 MobiDBLite consensus disorder prediction 41 56 - -
Mupr12074g00002 383 MobiDBLite consensus disorder prediction 27 117 - -
Mupr12074g00002 383 MobiDBLite consensus disorder prediction 269 313 - -
Mupr12074g00002 383 ProSiteProfiles PPC domain profile profile. 123 287 IPR005175 -
Mupr12074g00002 383 Gene3D - 128 278 - -
Mupr12074g00002 383 SMART AT_hook_2 69 81 IPR017956 GO:0003677
Mupr12074g00002 383 SMART AT_hook_2 102 114 IPR017956 GO:0003677
Mupr12074g00002 383 SUPERFAMILY AF0104/ALDC/Ptd012-like 125 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12074g00002 Mupr-Chr12074 8229 12315 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12074g00002 62 354 AT-hook Motif Nuclear Localized (AHL) Family AT4G17950 41.176 7.32e-65 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12074g00002 - - pvu:PHAVU_002G006700g 425.246