Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12053g00002 ATGGGTGACGAACAACCGACGACCACCGCCGGCTCCGGTCTCCGGCGAGCCGTAGCGCTCATTTCCTCCTTGATCTCCCTCTCCCTCACGATCAGAGTCTTCGCCGGAAAATGGCAACTGATTCGGACCAGGCTGGAGGAGCTCCACTCCGGACTGGTATCCAGCGAGGCCACGTCACTCTCCGGCGAGCTCCCGGCGATAACGGGCACGGCGGAGGAGTGCCACGAGCTGGCGCGACGGTGCGTGGATCTGTCCTACAGTGGGAAGCTTTTGATGCAGAGCGACTTGGACGTGACGTTGGGGAAGTTGGAAGCGCACGTGAAGAAGCTCTCCGAGATATTCAAGAAGCGCGTTTCGATGCATGGCTACGCTGTTGTGGTTTCAAGACCTGGTTTTGGAGCTTGCAAGGATGACATGAGGTTCTACCTAAGGGACTTGATGAATAGGATGAGGGTTGGTGATTTGGGTATGAAGAAGATGGCGTTGATGAACTTGCATGAGGTTGTTACTGAGGATGAGAAGTATGTTAAGTTGGTTGTTGAGGTTTCCGAGTTTGTTCACGTGTTGGTAGATTTTCTTTGTTCTAACGAGGTTGAGGTTGTCGAGGAGGCTGCCAAGGTTGTTTCTGTGGTTGCGGGGTTTGATTCCTATAAAGGGGTTTTGGTCGGTGCTGGTGTTATTGCGCCTTTGATTCGGATTTTGGAATGTGGGAGTGAGGTTGGGAAGGTTTGTGCTGCGAGGTGTTTGCATAGGTTGACCGAGAATTCGGATAATGCGTGGGGCGTTTCGGCTCACGGAGGTGTCACTGCTTTGTTGAGAATTTGTGAGAGTGTGGAGTGTTGTAAAGGGGAATTAATTGGTCCTGCTTGTGGGGTGTTGAGGAATCTTTGTGCTGTTGAGGAAATCAAGAGGTTTATGGTTGAGGAGGGTGTGGTTTCCACTTTCGTGAGGCTTGTGAGGTCTAAGGATGAAGCGGTTCAAGTGAGTTCTATAGAGTTTATTCAAAGCATTGCCTCTGGTGATGAGTCAGTTAGGCAGATGGTGGTTAAAGAAGGAGGGGTTCGTGTTTTGTTGCGTGTTTTGGATCCCAAATGGACTTGTTCGTCGAAAACAAGAGAGGTTGTGATGAGGGGTGTTGAGAATTTGTGTTTTTCTTCGCCTAGTTGTGTTGGTGTTTTGATTAGTTATGGCTTTGTTGATCAGTTGATGTATTATGTTCGAAATGGAGAGGTTTTGATTCAGGAGTTGGCACTGAAGGTGGTGTTTAGATTCTGTCAAACATCAGAGGAGGCTAAGAAGGCTTTGGGCGATGCGGGGTTCATGGCAGAGCTTGTGAAATTTCTGAATGCGAAATCGTTTGAAGTTCGTGAAATGGCAGCAGAGTCACTCTCTGCCATGGTTATGGTGACAAGAAATAGGAAGAGGTTTGTGCAGGATGACCAAAACATTGCTCTTCTTCTGCAATTGCTGGATCCAGGGGAGGGGAATTCACGTAACAAGAAGTTGTTGATCTCTATCTTGATGTCACTGACAAATTGCAACAGTGGGAGGAAAAAAATTGTGAGTTCTGGGTATGCCAAAAACATAGAGAGGCTTGCAGAAGCTGAGGTTTCTTCTGATGCCAAGAGGCTCGTGAGGAAGCTATCCACAAACCGGTTCCGCATCTTGGCTTGTTCCAAACGCTACTACGAAAATGAGATCAATTAA 1707 0.4839 MGDEQPTTTAGSGLRRAVALISSLISLSLTIRVFAGKWQLIRTRLEELHSGLVSSEATSLSGELPAITGTAEECHELARRCVDLSYSGKLLMQSDLDVTLGKLEAHVKKLSEIFKKRVSMHGYAVVVSRPGFGACKDDMRFYLRDLMNRMRVGDLGMKKMALMNLHEVVTEDEKYVKLVVEVSEFVHVLVDFLCSNEVEVVEEAAKVVSVVAGFDSYKGVLVGAGVIAPLIRILECGSEVGKVCAARCLHRLTENSDNAWGVSAHGGVTALLRICESVECCKGELIGPACGVLRNLCAVEEIKRFMVEEGVVSTFVRLVRSKDEAVQVSSIEFIQSIASGDESVRQMVVKEGGVRVLLRVLDPKWTCSSKTREVVMRGVENLCFSSPSCVGVLISYGFVDQLMYYVRNGEVLIQELALKVVFRFCQTSEEAKKALGDAGFMAELVKFLNAKSFEVREMAAESLSAMVMVTRNRKRFVQDDQNIALLLQLLDPGEGNSRNKKLLISILMSLTNCNSGRKKIVSSGYAKNIERLAEAEVSSDAKRLVRKLSTNRFRILACSKRYYENEIN 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12053g00002 568 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 10 556 - -
Mupr12053g00002 568 SMART arm_5 299 339 IPR000225 GO:0005515
Mupr12053g00002 568 SMART arm_5 214 254 IPR000225 GO:0005515
Mupr12053g00002 568 SMART arm_5 255 298 IPR000225 GO:0005515
Mupr12053g00002 568 SMART arm_5 341 384 IPR000225 GO:0005515
Mupr12053g00002 568 SMART arm_5 172 213 IPR000225 GO:0005515
Mupr12053g00002 568 SMART arm_5 428 468 IPR000225 GO:0005515
Mupr12053g00002 568 Gene3D - 143 552 IPR011989 -
Mupr12053g00002 568 SUPERFAMILY ARM repeat 143 545 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12053g00002 Mupr-Chr12053 18004 20829 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12053g00002 114 424 U-box Gene Family AT2G23140 22.713 2.41e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12053g00002 - - gmx:100783537 942.184