Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12053g00001 ATGTCGAGTATAACATTTTTCCATCGTCTTTCTAAAGCTTTCCGTGACAATCAGTCTCATCTTAAGCTTGTACTGCTCTGCACCGCCGTAAGTGGTGGTGGCCTTTTGGCTTATGGTGAGAGTGTTGCACCAGAAGAAGTAGTTACGGAGAAGAAGAAGGTGGTGGTGCTGGGAACTGGTTGGGCGGCCACGAGTTTCATGAAGAATCTGAACAATCCGAAATATGATGTTCAAGTAGTTTCGCCTCGTAACTACTTTGCATTCACTCCTTTGCTGCCTAGCGTTACGTGCGGCACCGTAGAAGCGCGCAGCATTGTTGAGCCAGTTCGCACTATTTTTAGGAAGAAGATTCTGGGGTCGAGGGCTATAACTAGGCCCTTTTTCTTGTTTTCTTTTGAGCAGAGAAAGGTGGGCGTTCAATTCAGTGAAGCAGAATGTTTCAAGATTGACGCAGAAAATAGGAAAGTTTACTGCCGATCTAGTGTGAACAATAATTTGAACGAGAAAGAAGAATTTGTCGTAGATTATGACTACCTAATAATTGCCGTGGGCGCTAATGTCAACACATTTAATACTCCAGGAGTGATGGAGAATTGCCATTTTTTGAAGGAAGTTGAAGATGCCCAAAAGATTAGAAGAACTGTTATTGACTGCTTCGAGAGAGCAAATTTGCCAGATGTAAGTGAAGATGAGAAGAAGAGATTTCTTCATTTTGCTATTGTTGGAGGTGGACCTACTGGAGTGGAGTTTGCAGCCTCACTTCATGATTTTGTCAATGAGGATTTGGTCCGTTTATATCCTGGGATAAAAGATTTGGTTAAAATTACACTTCTGGAGGCCGGAGATCATATCTTGGGCATGTTTGACAAGAGAATCACTGCTTTTGCTGAAGACAAGTTTCGAAGAGAGGGGATTGATGTGAAAACAGGATCCATGGTGGTTAAGGTATCTGAGAAAGAAATTTCCACTAAAGAACTGAAAAATGGAGGAGTGATTAAGAATATTCCGTATGGAATGGCTGTCTGGTCAACTGGTATTGGCACTCGTCCACTTATTAAAGATTTTATGACACAAATCGGTCAGGCTAGTAGGCGTGCTCTAGCTACAGACGAATGGTTGAGAGTTGAAGGGTGCTGCAATGTGTATGGGCTCGGTGATTGTGCTACGATAAACCAGCGAAAAGTCATGGAAGATATTGCGGTGATCTTTAAGAAGGCTGACAAAGACAATTCTGGAACACTTACTATAAAAGAATTTCAAGAGGTCATGAAAGATATCTGTGAAAGATACCCTCAGGTTGAGCTATATCTGAAGAATAAACAGATGGGCGACATTGCTGATTTATTGAAGGAAGCCAAGGGAGATGATAAAGAATCAATTGAACTGAATATAGAAGAAGTCAAAACAGCACTTTCCAAAGTGGATTCTCAAATGAAATTTCTCCCTGCTACAGCCCAGGTTGCATCTCAGCAAGGCACTTACCTGGCCAAGTGTTTTAACCGGATGGAAGAGTGTGAAAAAAATCCAGAGGGTCCTCTCAGGTTCAGGGGGGAAGGTCGCCATCGGTTCAAACCCTTTAGGTACAAGCATTTAGGTCAATTCGCTCCTTTAGGAGGAGAGCAGACAGCAGCCCAGCTTCCTGGAGATTGGGTTTCAATTGGCCATAGCAGTCAATGGCTGTGGTATTCTGTCTATGCAAGTAAGCAAGTAAGCTGGCGTACAAGAGCATTAGTAGTTTCAGACTGGACAAGACGTTTTATTTTTGGAAGGGACTCAAGCAGCATTTGA 1788 0.4279 MSSITFFHRLSKAFRDNQSHLKLVLLCTAVSGGGLLAYGESVAPEEVVTEKKKVVVLGTGWAATSFMKNLNNPKYDVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRTIFRKKILGSRAITRPFFLFSFEQRKVGVQFSEAECFKIDAENRKVYCRSSVNNNLNEKEEFVVDYDYLIIAVGANVNTFNTPGVMENCHFLKEVEDAQKIRRTVIDCFERANLPDVSEDEKKRFLHFAIVGGGPTGVEFAASLHDFVNEDLVRLYPGIKDLVKITLLEAGDHILGMFDKRITAFAEDKFRREGIDVKTGSMVVKVSEKEISTKELKNGGVIKNIPYGMAVWSTGIGTRPLIKDFMTQIGQASRRALATDEWLRVEGCCNVYGLGDCATINQRKVMEDIAVIFKKADKDNSGTLTIKEFQEVMKDICERYPQVELYLKNKQMGDIADLLKEAKGDDKESIELNIEEVKTALSKVDSQMKFLPATAQVASQQGTYLAKCFNRMEECEKNPEGPLRFRGEGRHRFKPFRYKHLGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASKQVSWRTRALVVSDWTRRFIFGRDSSSI 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12053g00001 595 ProSiteProfiles EF-hand calcium-binding domain profile. 394 429 IPR002048 GO:0005509
Mupr12053g00001 595 PANTHER NADH DEHYDROGENASE 48 595 IPR045024 GO:0003954|GO:0006116
Mupr12053g00001 595 PRINTS FAD-dependent pyridine nucleotide reductase signature 176 194 - -
Mupr12053g00001 595 PRINTS FAD-dependent pyridine nucleotide reductase signature 237 255 - -
Mupr12053g00001 595 Gene3D - 43 440 - -
Mupr12053g00001 595 Gene3D - 441 594 - -
Mupr12053g00001 595 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 440 594 - -
Mupr12053g00001 595 SUPERFAMILY FAD/NAD(P)-binding domain 51 289 IPR036188 -
Mupr12053g00001 595 SUPERFAMILY FAD/NAD(P)-binding domain 237 391 IPR036188 -
Mupr12053g00001 595 ProSitePatterns EF-hand calcium-binding domain. 407 419 IPR018247 -
Mupr12053g00001 595 Pfam Pyridine nucleotide-disulphide oxidoreductase 52 397 IPR023753 GO:0016491
Mupr12053g00001 595 SUPERFAMILY EF-hand 388 482 IPR011992 -
Mupr12053g00001 595 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 43 423 - -
Mupr12053g00001 595 SMART efh_1 398 426 IPR002048 GO:0005509
Mupr12053g00001 595 Pfam EF hand 400 425 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12053g00001 Mupr-Chr12053 5261 10970 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12053g00001 1 595 Chloroplast and Mitochondria Gene Families AT4G21490 70.432 0.0 850
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12053g00001 K03885 - gmx:100797657 1075.08