Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12047g00001 ATGAGTTCCAATTCCAAACAGAGTCAATTTCCCAAAGAAGTAGCAAAGGTGGACGATGCTTATCTCTCTGCTATGATACTTTGTTTTAGCCGAGTTTTCCCAGCAATCTTAAATGCTGCTATTGATCTCAATTTATTTGAGATCATAGCCAAGGCACAAAGATCATGTGCTTCATCTTTATCTGCCTCTGAGGTTGCTTCTCTGCTTCCAAATCAACACCCACAATTGGTTAATAGGCTTGAACGCATCTTGCCTGTGTTGGCTAGTTATTCTCTTCTCAATTGTTCCATTCGCAACAATGAAGATGGGAACAGAGAAAGGGTTTATACTCTCTCTTCCGTTGGTGCATACTTTATGATGGATGTGAAGGATGCAATTGTGGATCCTAGCAATAATAACCATTTCCAAAAAATCCGTGGAATGCCATGTTATCAATATATGGAGACAAATAATGAACTTAATCACCATTTTAACAAAGCGATGGCCCAATCCAGTCCACTAGAAATGAAAAGGACCCTTATGGTGTACAAAGGATTTGAGGAAATATCAACATTGGTAGATGTAGGAGGTGGGGTAGGGCAGACTTTGAAAATTGTTATCTCTGAGTATCCTTCCATAAAAGGAATTAATTTTGACTTGCCTCAAGTGGTTCGAGATGCACCACCCCATCCAGGGATCGAACATGTTGGAGGAGATATGTTTGAAAGTGTTCCAACCGGTGATGCCATTTTATTAAAGTTTGTATGTCATAATTGGACAGATGAAGAGTGTGTAAAGTTTTTAAAGAATTGCCACAAGGCTTTGCCACAACATGGGAAGGTGATTGTTCAGGACTATGTAATTCCAGAAGTTCCAGATTCAAGCAAAATATCTAAGTTCACTTGTGCTCTTGACAATGTTATGTTTCTAATAACTGGTGGAAAGGAAAGAACTGAGAAAGAGTTTGAGAGATTATGTAAGAGCTCTGGATTTTCTAAATTCCACGTTGCTTGCAGCGAAATCTCAGTTATGACAGGACTGATGGAATTTTATAAATAA 1038 0.3863 MSSNSKQSQFPKEVAKVDDAYLSAMILCFSRVFPAILNAAIDLNLFEIIAKAQRSCASSLSASEVASLLPNQHPQLVNRLERILPVLASYSLLNCSIRNNEDGNRERVYTLSSVGAYFMMDVKDAIVDPSNNNHFQKIRGMPCYQYMETNNELNHHFNKAMAQSSPLEMKRTLMVYKGFEEISTLVDVGGGVGQTLKIVISEYPSIKGINFDLPQVVRDAPPHPGIEHVGGDMFESVPTGDAILLKFVCHNWTDEECVKFLKNCHKALPQHGKVIVQDYVIPEVPDSSKISKFTCALDNVMFLITGGKERTEKEFERLCKSSGFSKFHVACSEISVMTGLMEFYK 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12047g00001 345 Gene3D Vaccinia Virus protein VP39 154 332 IPR029063 -
Mupr12047g00001 345 FunFam Caffeic acid 3-O-methyltransferase 2 118 - -
Mupr12047g00001 345 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 121 331 IPR029063 -
Mupr12047g00001 345 Pfam O-methyltransferase domain 121 325 IPR001077 GO:0008171
Mupr12047g00001 345 Pfam Dimerisation domain 36 88 IPR012967 GO:0046983
Mupr12047g00001 345 FunFam Uncharacterized protein 100 345 - -
Mupr12047g00001 345 PIRSF O-mtase 118 345 IPR016461 GO:0008168
Mupr12047g00001 345 PIRSF O-mtase 1 129 IPR016461 GO:0008168
Mupr12047g00001 345 PANTHER O-METHYLTRANSFERASE 25 333 IPR016461 GO:0008168
Mupr12047g00001 345 SUPERFAMILY "Winged helix" DNA-binding domain 18 119 IPR036390 -
Mupr12047g00001 345 CDD AdoMet_MTases 184 281 - -
Mupr12047g00001 345 Gene3D - 32 172 IPR036388 -
Mupr12047g00001 345 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 345 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12047g00001 Mupr-Chr12047 1679 4814 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12047g00001 1 345 Monolignol Biosynthesis Gene Families AT5G54160 44.865 9.30e-104 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12047g00001 - - gmx:106794104 511.531