Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12034g00001 ATGGGGAAGCCAATGGGGAAGAAGAAGGGTAGTGGTACTCGGGGTGGTGCTAGCTCACACGGCAAGGCCGGGAAGGCTTTGGATGAAGACACTGCCATGTTCATCAACATGTCTCAAGAGCTCAGGGAAGAGGGCAACAAGCTGTTTCAGAGGAAGGACCACGAAGGCGCCATGCTCAAGTACGAGAAAGCTCTCAAGCTCCTCCCCAACAACCACATAGATGTCGCCCACCTTCACACCAACATGGCCACTTGTTACATGCTTTTGGGTCTCGGGGAATACCCCAGGGCCATTCACGAATGCAATTTGGCCTTGCAAGTCTCCCCCAGGTACACTAAAGCTCTTCTCAAAAGAGCTACCTGCTATCGTGCGCTTAATCGCTTTGATTTGGCTCTCAGGGATGTCAATCTTGTCTTGGGCTTTGAACCTAATAATCTCACCGCCTTGGACTTTCTCGACAGTCTCACCAAGTCATCTGAAGGAAAAGGAGTCTCTCTTGATGATAAGGGGGTGACTTTTGATTCCCTTTACCACACCCCTGCTCCTTCTTCGCAGAAACTGAAGAAAAAGAGAGGTAAAAGAGTTGAGGATAAGGTGGTTGTGGAGGAAAATTTGAGTGCTGTTCAGGATAAACAACTGGTTTCGAAAACAATTGAACAAGAAAATAAGGTGGTGGAGGAAGAAAAATCAAGTGATGGTGTGGAAGAAAGCAAAGGCAAAGATAAAGATGTGGCAGAAAGGATGATTACTGTGGAAGAAGAAAAGCCTGTCACAATCACAAGGACTGTGAAGTTGGTGTTTGGAGAGGATATAAGGTGGGCAGAGTTACCTGTGAATTGTAGTGTGAAGTTGGTGAGGGATATAGCTAGGGATCGGTATCTGGGTTTGAAGGGTGTTCTTCTCAAGTTTAAGGATAAAGAAGGTGATTTGGTTACAATCACTACTACGGATGAACTAAGGTTAGCTGAAAAATCTTGTCCTCAGAAGGCATCGTTTAGGCTTTATATTACTGAGGTCAATCCAGATCAAGAGCCTTCTTATGACGATGGAGTAACCAATGAAGATGAGGTGCCAAGGGGTGGTGGGAAACCAAGTGATGGTGTTGAGAATGGGGGTATGGAAGAAGGAAAAGATAAAGATGTAGCAAAAAGGATGATTACTGTGGAGGACTGGCTTCTCCAGTTTGCAAGGCTGTTCAAGAACCATGTAGGGTTTGAGTCTGATTCCTATCTAGATACTCATGAGTTTGCAATGAAGCTGTATAAAGAAGCAATGGAGGATACTGTAACAGGCAACGATGCTCAAGAACTTTTTGAAATTTCTGCGGATAAATTTCAAGAGATGGCTGCTTTGGCACTGTTTAATTGGGGGAGTGTTCAAATGTCCAGGGCTAGGAACCAGGGTTTCCTTTCGGAGGATGGGGCAAGAGAATCTTCCTTGGAGCATATAAAAGCTGCGTACGAATTGGCCCAAAAGGAGTACAAGAAAGCAGAAATGAGATATGAAGAAGCCTTGAAAATCAAACCTGACTTCTATGAAGGATATCTTGCTCTTGGGCATCAGCAGTTTGAGCAAGCAAGGCTATGCTGGTGTTATGCAATGGCATGCAAGATGGACTTAGCTGGCTTTTCTGATGAGGTTCTACAACTCTATAACAGGGCAGAGGACAGCATGGAGAAGGGCATCTTGATGTGGGAGGAGATGGAGGAGCAGCGTCTAAATGGAATATCCAAATCAGATAAATACAAAGAACAGTTAGAGAAAATGGGCTTGGATAGTCTTTTCAAAGATGTTTCTTATGATGAAGCTTCAAAGCAAGCTGCAAAGATGAGGTCTCAGATACATCTTTTATGGGGTACCTTGTTGTATGAACGTTCTGTTGTTGAATATAAGCTTGGCCTTCCCTCGTGGGAGGAATGTTTGGAGGTTGCAGTTGAAAAGTTTGAACTAGCTGGGACTTCTGCAACGGATATTGCCTTCATTGTAAAGAATCACTGCTCTAATGAAACAGCACTTGAAGGATTCAAAATTGATGAGATAGTGCAGGCATGGAATGAGATGTATGACGCCCAGGGGTGGCAGTTTGGTGATCCATCATTTCGACTTGAACCATTGTTTCGTCGGCGTTTGGCTTCATCCCATTCTAAGGCAGAAACTTTAGGTGAGTTGGGTTTCGGAGACTCATTAGGATCAAATGAGCACATATAA 2208 0.4443 MGKPMGKKKGSGTRGGASSHGKAGKALDEDTAMFINMSQELREEGNKLFQRKDHEGAMLKYEKALKLLPNNHIDVAHLHTNMATCYMLLGLGEYPRAIHECNLALQVSPRYTKALLKRATCYRALNRFDLALRDVNLVLGFEPNNLTALDFLDSLTKSSEGKGVSLDDKGVTFDSLYHTPAPSSQKLKKKRGKRVEDKVVVEENLSAVQDKQLVSKTIEQENKVVEEEKSSDGVEESKGKDKDVAERMITVEEEKPVTITRTVKLVFGEDIRWAELPVNCSVKLVRDIARDRYLGLKGVLLKFKDKEGDLVTITTTDELRLAEKSCPQKASFRLYITEVNPDQEPSYDDGVTNEDEVPRGGGKPSDGVENGGMEEGKDKDVAKRMITVEDWLLQFARLFKNHVGFESDSYLDTHEFAMKLYKEAMEDTVTGNDAQELFEISADKFQEMAALALFNWGSVQMSRARNQGFLSEDGARESSLEHIKAAYELAQKEYKKAEMRYEEALKIKPDFYEGYLALGHQQFEQARLCWCYAMACKMDLAGFSDEVLQLYNRAEDSMEKGILMWEEMEEQRLNGISKSDKYKEQLEKMGLDSLFKDVSYDEASKQAAKMRSQIHLLWGTLLYERSVVEYKLGLPSWEECLEVAVEKFELAGTSATDIAFIVKNHCSNETALEGFKIDEIVQAWNEMYDAQGWQFGDPSFRLEPLFRRRLASSHSKAETLGELGFGDSLGSNEHI 735
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mupr12034g00001 735 Gene3D - 250 339 - -
Mupr12034g00001 735 Pfam PB1 domain 260 337 IPR000270 GO:0005515
Mupr12034g00001 735 SUPERFAMILY CAD & PB1 domains 259 347 - -
Mupr12034g00001 735 SUPERFAMILY TPR-like 447 616 IPR011990 GO:0005515
Mupr12034g00001 735 CDD PB1 262 336 - -
Mupr12034g00001 735 SUPERFAMILY TPR-like 33 152 IPR011990 GO:0005515
Mupr12034g00001 735 ProSiteProfiles TPR repeat profile. 38 71 IPR019734 GO:0005515
Mupr12034g00001 735 Gene3D Tetratricopeptide repeat domain 35 162 IPR011990 GO:0005515
Mupr12034g00001 735 PANTHER PROTEIN CLMP1 1 718 IPR044517 -
Mupr12034g00001 735 Coils Coil 480 507 - -
Mupr12034g00001 735 MobiDBLite consensus disorder prediction 341 379 - -
Mupr12034g00001 735 SMART tpr_5 478 511 IPR019734 GO:0005515
Mupr12034g00001 735 SMART tpr_5 112 145 IPR019734 GO:0005515
Mupr12034g00001 735 SMART tpr_5 38 71 IPR019734 GO:0005515
Mupr12034g00001 735 SMART tpr_5 76 111 IPR019734 GO:0005515
Mupr12034g00001 735 MobiDBLite consensus disorder prediction 1 25 - -
Mupr12034g00001 735 SMART PB1_new 260 339 IPR000270 GO:0005515
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mupr12034g00001 Mupr-Chr12034 5021 7961 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12034g00001 28 145 Calmodulin-binding Proteins AT3G25230 29.134 5.57e-07 51.2