Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12030g00002 ATGGCGGAGGCAGAGGAACTGCCCCGGGCTATCGTGCGCCACGTGGTGAAGGATAAGCTATCCCGTTGCTCCGAAGATGGAGACATTTCCGTTAGCAAAGACGGTCTTCTGGCATTCTCCGAAAGCGCGAGGATCTTCATCCACTACCTTTCCGCCACGGCTAATGACATATGTAAAGAGTCAAAGAGACAGATTATCAATGCTGAGGATGTTTTCAAAGCTCTTGAAGAAACTGAGTTCCCTGAGTTTGTTCGCCCTCTAAAAGCTTCACTTGAAGAGTTTAGGAAGAAGAATGCTGGAAAGAAGGCAACAGTGTCAAAGGGAAAGGAAGAAGGGGCCAAAAAGAAAAGAAAGTTGGAAGGTGAGTCATCTGATAAAGGTGACGGTTCTGATAAAGGGGACGACACTGATAAAGGTGAGGGTGGTGACGGCCAATGA 438 0.4772 MAEAEELPRAIVRHVVKDKLSRCSEDGDISVSKDGLLAFSESARIFIHYLSATANDICKESKRQIINAEDVFKALEETEFPEFVRPLKASLEEFRKKNAGKKATVSKGKEEGAKKKRKLEGESSDKGDGSDKGDDTDKGEGGDGQ 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12030g00002 145 PANTHER DNA POLYMERASE EPSILON SUBUNIT 3 4 138 - -
Mupr12030g00002 145 SUPERFAMILY Histone-fold 7 120 IPR009072 GO:0046982
Mupr12030g00002 145 Gene3D Histone, subunit A 1 141 IPR009072 GO:0046982
Mupr12030g00002 145 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 7 75 IPR003958 -
Mupr12030g00002 145 MobiDBLite consensus disorder prediction 98 145 - -
Mupr12030g00002 145 Coils Coil 58 78 - -
Mupr12030g00002 145 FunFam DNA polymerase epsilon subunit 3 1 140 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12030g00002 7 107 CCAAT-HAP3 Transcription Factor Family AT4G14540 29.703 1.50e-10 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mupr12030g00002 CBFD_NFYB_HMF 1.7e-07 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12030g00002 K02326 - gmx:100306382 198.749