Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1202g00002 ATGTCTTCTGCAGAAATTGAGTACCGATGCTTTGTTGGTGGGCTAGCTTGGGCCACCGATAACGAGGCTCTTGAGAAAGCCTTCTCTCCGTTTGGCGAGATCGTCGAATCGAAGGTCATCAACGATCGTGAAACTGGAAGGTCCAGAGGCTTCGGATTCGTCACCTTCGCCACGGAGCAGTCCATGAGGGACGCCATCGAAGGAATGAACGGTCAGAATCTCGATGGCCGGAATATCACCGTAAACGAGGCACAGTCACGTGGAAGAGGAGGCGGTGGAGGTGGTGGTGGTGGTTACGGAGGCGGTGGTGGTGGATACGGAGGTGGTGGCGGTGGATATGGTGGTGGCGGAGGGTATAGCCGCGGTGGAGGGGGATATGGAGGAGGTGGCCGTCGCGAAGGTGGTGGTGGTGGTGGCTATAATCGTAATGGTGGCGGCGGCGGTGGATATGGTGGTGGCGGTGGATATGGAGGCGGAGGTGGTGGTGGTTATGGTGGTGGGCGAGACCGTGGGTATGGAGACGGTGGGCCCCGCTACTCGAGAGGTGGTGGGGCTTCGGATGGTGGAAGCTGGAGGAATTAG 582 0.5893 MSSAEIEYRCFVGGLAWATDNEALEKAFSPFGEIVESKVINDRETGRSRGFGFVTFATEQSMRDAIEGMNGQNLDGRNITVNEAQSRGRGGGGGGGGGYGGGGGGYGGGGGGYGGGGGYSRGGGGYGGGGRREGGGGGGYNRNGGGGGGYGGGGGYGGGGGGGYGGGRDRGYGDGGPRYSRGGGASDGGSWRN 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1202g00002 193 Gene3D - 2 119 IPR012677 -
Mupr1202g00002 193 FunFam Glycine-rich RNA-binding protein GRP1A 2 116 - -
Mupr1202g00002 193 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Mupr1202g00002 193 SUPERFAMILY RNA-binding domain, RBD 9 118 IPR035979 GO:0003676
Mupr1202g00002 193 SMART rrm1_1 9 82 IPR000504 GO:0003723
Mupr1202g00002 193 CDD RRM2_NsCP33_like 9 84 - -
Mupr1202g00002 193 PANTHER GEO13361P1-RELATED 7 177 - -
Mupr1202g00002 193 MobiDBLite consensus disorder prediction 161 193 - -
Mupr1202g00002 193 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1202g00002 Mupr-Chr1202 3592 4442 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1202g00002 10 81 Eukaryotic Initiation Factors Gene Family AT2G23350 47.222 1.53e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1202g00002 - K13195 gsj:114414485 164.081