Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12027g00002 ATGGCAGCAGAAATTTGTGGCGGGTCTCTATTCTTATCCGTTAAAACTCAACTGCAACTGCAACAACAACGACACCACCAGCAACGCGCGTTCTTTCACGCTCAACGAAGCAGAACAAGAAGAAGCACAAGCACTACCAGTTTCCACTCGTCCAAACGCTGCTTTTCTTCTGGCTTTCCAAATGTGTCCGCGTTTCGCCGCCGTGTCGCGTGCCAGGTTGCCAGCACCGACTTCGAATCCGCCGCCAAAGCCGGCGAGGATCGTCTCTCTAAGGTGCCGGTCCGTAATATAAGGAACTTCTGCATCATTGCGCATATTGACCACGGGAAATCCACGTTGGCGGATAAGTTGCTTCAGGTTACTGGCACGGTGCACCAGCGAGAGATGAAGGATCAGTTTCTCGATAACATGGATTTGGAGAGGGAAAGAGGCATTACTATTAAGCTCCAGGCAGCTCGAATGCGTTATGTGTTTGAAAATGAACCTTATTGCTTGAATCTGATAGATACACCCGGCCATGTCGACTTCTCATATGAGGTTTCTCGGTCACTCGCTGCATGTGAGGGTGCTCTTCTTGTAGTAGATGCTTCTCAGGGGGTTGAAGCCCAAACACTAGCTAATGTTTATTTGGCTTTGGAGAACAACCTAGAAATTATCCCTGTTTTGAACAAAATAGATCTCCCAGGTGCAGAACCAGATCGAGTTATCAAGGAGATTGAGGAGATTGTAGGTCTAGATTGTAGCAATGCGATTCTCTGCTCTGCAAAGGAAGGAATAGGTATAATTGATATTCTCAATGCAATTGTTGCAAGAATTCCCCCACCTGTAGATACATCTGAAAGACCATTGAGGGCTTTAATATTTGATAGTTACTATGATCCATATAGAGGTGTTATTGTATACTTTCGAGTTGTAGATGGGACTATAAAGAAAGGTGACAGAGTTTTTTTTATGGCTAGTGGGAAGGACTATTTTGCGGATGAAATTGGAGTTTTGTCTCCCAATCAACTACAAGTTAATGAATTGTATGCTGGTGAGGTAGGCTATTTATCTGCATCAATAAGAACAGTAGCTGATGCTAGAGTGGGTGACACTATTACTCACTATGGCAGAAAGGCGGATAATTCTCTCCCTGGATATGAGGAGGCCACTCCTATGGTGTTCTGTGGCCTGTTTCCTGTTGATGCTGACCAATTCCCTGAGTTGCGTGATGCACTTGAGAAGCTACAACTGAATGATGCTGCACTGAAGTTTGAACCTGAGACCTCGAGTGCCATGGGATTTGGCTTTAGATGTGGGTTTTTGGGTCTTCTTCATATGGAAATTGTTCAGGAGAGACTTGAGAGAGAATACAATTTGAGCCTGATAACTACTGCTCCAAGTGTTGTGTACAGAGTAAACTGTGTAAATGGTGATACTGTTGAATGCTCAAATCCATCTTTACTTCCTGAACCTGGAAAAAGGAAATCAATTGAGGAGCCATTTGTTAAGATTGATATGCTTACACCAAAGGACTACATTGGTCCACTCATGGAACTAGCACAGGAAAGAAGAGGGCAATTCAAGGAAATGAAATTTATCGCTGAAAATAGGGCATCAATCACCTATGAATTACCACTTGCAGAGATGGTTGGTGATTTCTTTGATCAGTTAAAGTCAAGAAGTAAGGGTTATGCTAGTATGGAGTATACCTTTGTCGGGTACATAGAAAGTAATTTAATTAAACTTGACATCCGGATAAATGGTGATTGCGTGGAGCCATTGGCTACAATTGTGCACAATGATAAGAAAATCAACAGAGGCTTGTATTTTCAGGCATATTCTGTGGGAAGGGCTTTGACTCTAAAGTTGAAGGAGCTTATACCACGGCAAATGTTTAAAGTACCAATTCAAGCATGCATAGGATCAAAAGTAATTGCTAGTGAAGCGATATCTGCAATAAGGAAGGATGTACTGGCCAAATGCTACGGTGGGGACATTTCAAGAAAAAAGAAATTGCTTAAGAAACAGGCTGAAGGAAAGAAAAGGATGAAGTCTATTGGTAAAGTTGATGTACCCCAAGAAGCTTTCATGGCAGTTTTGAAACTTGAAAAGGAGAATTCGGGCACCAGAACAGATAATTGA 2124 0.4266 MAAEICGGSLFLSVKTQLQLQQQRHHQQRAFFHAQRSRTRRSTSTTSFHSSKRCFSSGFPNVSAFRRRVACQVASTDFESAAKAGEDRLSKVPVRNIRNFCIIAHIDHGKSTLADKLLQVTGTVHQREMKDQFLDNMDLERERGITIKLQAARMRYVFENEPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPDRVIKEIEEIVGLDCSNAILCSAKEGIGIIDILNAIVARIPPPVDTSERPLRALIFDSYYDPYRGVIVYFRVVDGTIKKGDRVFFMASGKDYFADEIGVLSPNQLQVNELYAGEVGYLSASIRTVADARVGDTITHYGRKADNSLPGYEEATPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRKSIEEPFVKIDMLTPKDYIGPLMELAQERRGQFKEMKFIAENRASITYELPLAEMVGDFFDQLKSRSKGYASMEYTFVGYIESNLIKLDIRINGDCVEPLATIVHNDKKINRGLYFQAYSVGRALTLKLKELIPRQMFKVPIQACIGSKVIASEAISAIRKDVLAKCYGGDISRKKKLLKKQAEGKKRMKSIGKVDVPQEAFMAVLKLEKENSGTRTDN 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12027g00002 707 PANTHER TRANSLATION FACTOR GUF1-RELATED 72 696 IPR006297 GO:0005525
Mupr12027g00002 707 NCBIfam small GTP-binding protein domain 98 267 IPR005225 GO:0005525
Mupr12027g00002 707 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 135 150 IPR031157 -
Mupr12027g00002 707 NCBIfam translation elongation factor 4 96 696 IPR006297 GO:0005525
Mupr12027g00002 707 Gene3D - 572 655 IPR038363 -
Mupr12027g00002 707 CDD lepA_C 493 572 IPR035654 -
Mupr12027g00002 707 Gene3D - 94 276 IPR027417 -
Mupr12027g00002 707 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 294 IPR027417 -
Mupr12027g00002 707 CDD LepA 98 275 - -
Mupr12027g00002 707 Hamap Translation factor GUF1 homolog, organellar chromatophore [lepA]. 89 698 IPR027518 -
Mupr12027g00002 707 FunFam Translation factor GUF1, mitochondrial 572 655 - -
Mupr12027g00002 707 Gene3D Translation factors 278 377 - -
Mupr12027g00002 707 Gene3D Elongation Factor G (Translational Gtpase), domain 3 378 459 - -
Mupr12027g00002 707 SUPERFAMILY Translation proteins 257 379 IPR009000 -
Mupr12027g00002 707 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 95 276 IPR000795 GO:0003924|GO:0005525
Mupr12027g00002 707 Gene3D - 460 570 - -
Mupr12027g00002 707 FunFam Translation factor GUF1, mitochondrial 460 570 - -
Mupr12027g00002 707 SUPERFAMILY EF-G C-terminal domain-like 491 585 IPR035647 -
Mupr12027g00002 707 CDD EF4_III 385 460 - -
Mupr12027g00002 707 Pfam Elongation factor G C-terminus 491 575 IPR000640 -
Mupr12027g00002 707 SMART EFG_C_a 490 578 IPR000640 -
Mupr12027g00002 707 Pfam Elongation factor Tu domain 2 297 367 IPR004161 GO:0005525
Mupr12027g00002 707 Hamap Elongation factor 4 [lepA]. 92 699 IPR006297 GO:0005525
Mupr12027g00002 707 PRINTS GTP-binding elongation factor signature 182 193 IPR000795 GO:0003924|GO:0005525
Mupr12027g00002 707 PRINTS GTP-binding elongation factor signature 99 112 IPR000795 GO:0003924|GO:0005525
Mupr12027g00002 707 PRINTS GTP-binding elongation factor signature 218 227 IPR000795 GO:0003924|GO:0005525
Mupr12027g00002 707 PRINTS GTP-binding elongation factor signature 142 150 IPR000795 GO:0003924|GO:0005525
Mupr12027g00002 707 PRINTS GTP-binding elongation factor signature 166 176 IPR000795 GO:0003924|GO:0005525
Mupr12027g00002 707 FunFam Translation factor GUF1, mitochondrial 378 459 - -
Mupr12027g00002 707 SUPERFAMILY EF-G C-terminal domain-like 384 462 IPR035647 -
Mupr12027g00002 707 FunFam Translation factor GUF1, mitochondrial 278 376 - -
Mupr12027g00002 707 FunFam Elongation factor 4 94 277 - -
Mupr12027g00002 707 Pfam GTP-binding protein LepA C-terminus 580 695 IPR013842 -
Mupr12027g00002 707 CDD EF4_II 283 368 - -
Mupr12027g00002 707 Pfam Elongation factor Tu GTP binding domain 96 273 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12027g00002 Mupr-Chr12027 13484 25338 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12027g00002 95 330 Eukaryotic Initiation Factors Gene Family AT3G22980 34.538 1.70e-27 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12027g00002 K21594 - gmx:100784073 1244.57