Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12023g00001 ATGACTCGGCGGTGCTCCCACTGCAGCAACAACGGGCACAACTCTCGGACGTGCCCGACGCGGGGGGGCGGCGTCGGTGGTGGTGGCGGTGGCGGCGGCGTGAAGTTGTTCGGGGTGAGGCTGACGGATGGATCAATCATAAAGAAGAGCGCCAGCATGGGAAACCTTAACCTCTCCGCACATCACCATTCTTCCTCTTCCAACCTCGCCGCTTCATCGCCCAATCCAAGCTCTCCCTGCTCCGACCAGCCCGACGGCTACTTGTCCGATGACCCCGCTCATATCTCCACCTTCGCTAACCGCCGCGGAGAAAGAAAAAAAGGTGTTCCATGGACTGAAGAAGAACATCGTCTGTTCTTAATTGGTCTCCAGAAGCTGGGCAAAGGAGACTGGCGTGGGATTGCACGCAATTTTGTTGTATCAAGGACCCCTACTCAAGTAGCAAGTCATGCCCAGAAGTATTTTATCCGGCAGAGTCATGCTACCAGGAGAAAGAGACGTTCCAGCCTTTTTGACATGGTTCCAGATGTGTCTTCAGATCCACCTTCAGTGCCAGAAGAACAAGTGCTGCTTCCACCTACCGATAACTCACAACCCTGTAATGGAAAATCACAGCCTTCATTAAATCTCTCCCTGAAATCAGAATTTGAACCCATGGAAACTACTTCACAAGAAAATCTGGAAGAGACCAATGAAAGTATGATGGAATCAAACGGAGTGACACCTATGGCTCCTCATGGATTCTTCCCGGCATATTTACCTCTTCCATTTTCCATATGGCCATCAACTGTGGCTCCCTTTGAAGAAGTTAAGGGAGGAGAGACATCCAATCATCAGGTCCACAGGCCAATCCCAGTCATAGCCAAGGAACCTGTGAATGTTGACGAACTTGTGGGAATGTCACATCTCAGCATTGGGGAAACACAGGTACGTGATAGAGAGCCTTCTTCACTTTCCTTAAGGTTGTTAGGAGAGCCCTCAAGGCAGTCAGCATTCCATGCAAATGCTCCAGTTGCTGCTTCGGATTTAAACAGTGGCAAGAACAATGCAATTCAAGCGCAAATGAGCAAAAAATAA 1077 0.4995 MTRRCSHCSNNGHNSRTCPTRGGGVGGGGGGGGVKLFGVRLTDGSIIKKSASMGNLNLSAHHHSSSSNLAASSPNPSSPCSDQPDGYLSDDPAHISTFANRRGERKKGVPWTEEEHRLFLIGLQKLGKGDWRGIARNFVVSRTPTQVASHAQKYFIRQSHATRRKRRSSLFDMVPDVSSDPPSVPEEQVLLPPTDNSQPCNGKSQPSLNLSLKSEFEPMETTSQENLEETNESMMESNGVTPMAPHGFFPAYLPLPFSIWPSTVAPFEEVKGGETSNHQVHRPIPVIAKEPVNVDELVGMSHLSIGETQVRDREPSSLSLRLLGEPSRQSAFHANAPVAASDLNSGKNNAIQAQMSKK 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12023g00001 358 Gene3D - 109 160 - -
Mupr12023g00001 358 MobiDBLite consensus disorder prediction 336 358 - -
Mupr12023g00001 358 ProSiteProfiles SANT domain profile. 111 159 IPR017884 -
Mupr12023g00001 358 NCBIfam myb-like DNA-binding domain, SHAQKYF class 106 158 IPR006447 GO:0003677
Mupr12023g00001 358 Pfam Myb-like DNA-binding domain 110 155 IPR001005 -
Mupr12023g00001 358 MobiDBLite consensus disorder prediction 58 84 - -
Mupr12023g00001 358 CDD SANT 110 155 IPR001005 -
Mupr12023g00001 358 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 103 159 IPR017930 -
Mupr12023g00001 358 ProSiteProfiles Myb-like domain profile. 103 155 IPR001005 -
Mupr12023g00001 358 MobiDBLite consensus disorder prediction 190 212 - -
Mupr12023g00001 358 MobiDBLite consensus disorder prediction 341 358 - -
Mupr12023g00001 358 FunFam transcription factor MYB1R1 109 160 - -
Mupr12023g00001 358 MobiDBLite consensus disorder prediction 173 212 - -
Mupr12023g00001 358 MobiDBLite consensus disorder prediction 58 91 - -
Mupr12023g00001 358 SUPERFAMILY Homeodomain-like 105 159 IPR009057 -
Mupr12023g00001 358 MobiDBLite consensus disorder prediction 1 18 - -
Mupr12023g00001 358 SMART sant 107 157 IPR001005 -
Mupr12023g00001 358 PANTHER TRANSCRIPTION FACTOR KUA1 3 269 - -
Mupr12023g00001 358 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12023g00001 Mupr-Chr12023 4543 7949 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mupr12023g00001 Myb_DNA-binding 8.2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12023g00001 - - gmx:778036 578.17