Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12016g00001 ATGAAGGAAAAGGTGGATTCCCCAGTTACAGTCCTGGAGGACTATTTCAGGAGCTCAGATTCAGAATCAAGTTCTTCCAAAGAGCCTACAGTGGACTCTGAGTCTCATGACCTTTCAAAACCTGCTTCTAGGTGGGATGCGTTTGTTCAATTGTTAAGGAGCAAATCAAAGAAGCAAATGACCACATTGCATCCTCTCAGTGTCCTCAAACTCTCCAAAAGAATGAGCATTAGCATGAGGGAGACCATTCTCCCAAGTTGTCTCTTAGATGCAACTGCTTCCCCCTGCAGGTCACCCTGGAAGATCTTTACCCATCATGAGATCCAGCTTGCAACCAATTCTTTTAGCAAAGAAAATTTGATTGGGAAGGGTGGTTATGCTGAAGTTTACAAAGGGTGCTTGCCAAATGGTCAGCTAGTGGCAATTAAACGATTAACAAGAGGAACAGCTGATGAAACCATAGGGGATTTCCTATCAGAACTTGGCGTAATGGCGCATGTAAACCATCCCAATACTGCTAAGCTGGTTGGTTATGGGGTGGATGGTGGAATGCATCTAGTTCTTGAATTGTCTGAAAAGGGGAGCCTAGCTTCAGTTCTTTATGGTAATGGTTCCAAGGAGAAACTACCGTGGTGTATTAGGCACAAAATTGCATTAGGAATAGCCAAGGGTATATTATATCTTCATGAGGGTTGTCAGAGGAGAATTATCCACAGGGATATAAAAGCTGCCAATATCTTACTCACGGAGGATTTTGAGCCTCAGATTTGTGATTTCGGGCTAGCAAAATGGCTGCCAGAAAATTGGACTCACCACACCGTTTCAAAATTTGAAGGAACTTTCGGTTACCTAGCACCTGAATACTTGCTACATGGCATAGTAGACGAGAAAACAGACGTATTTGCCTTTGGTGTATTGCTTTTAGAATTAGTGAGTGGGCGCCGAGCACTTGATTATTCACAGCAAAGCCTTGTGTTGTGGGCAAAACCATTGCTGAAAAAAAATGATATTATTGAACTGATTGATCCTTCACTAGCGGATGAATTCGACTCTAGGCAGATGAATCTTGTGCTCTTGGCTGCTTCTTTATGCATACAACAGTCCTCAATTCGTCGTCCCTCTATAAGACAGGCACCATGTGACCCTTTGGTGCAGGTTGTACAACTTCTGAATGGTAACCTTAGCTGCTTTAAGGGCATGAAGAAAACTCGAATGCCGTTCTTCAGAAGAGTGTTCCGGGAAGAACTCCTTGATTCTGAATAG 1263 0.4323 MKEKVDSPVTVLEDYFRSSDSESSSSKEPTVDSESHDLSKPASRWDAFVQLLRSKSKKQMTTLHPLSVLKLSKRMSISMRETILPSCLLDATASPCRSPWKIFTHHEIQLATNSFSKENLIGKGGYAEVYKGCLPNGQLVAIKRLTRGTADETIGDFLSELGVMAHVNHPNTAKLVGYGVDGGMHLVLELSEKGSLASVLYGNGSKEKLPWCIRHKIALGIAKGILYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFGLAKWLPENWTHHTVSKFEGTFGYLAPEYLLHGIVDEKTDVFAFGVLLLELVSGRRALDYSQQSLVLWAKPLLKKNDIIELIDPSLADEFDSRQMNLVLLAASLCIQQSSIRRPSIRQAPCDPLVQVVQLLNGNLSCFKGMKKTRMPFFRRVFREELLDSE 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12016g00001 420 MobiDBLite consensus disorder prediction 1 38 - -
Mupr12016g00001 420 SMART serkin_6 115 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12016g00001 420 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Mupr12016g00001 420 Gene3D Transferase(Phosphotransferase) domain 1 192 389 - -
Mupr12016g00001 420 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 86 189 - -
Mupr12016g00001 420 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 192 404 - -
Mupr12016g00001 420 Gene3D Phosphorylase Kinase; domain 1 90 189 - -
Mupr12016g00001 420 Pfam Protein kinase domain 116 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12016g00001 420 PANTHER OS08G0249100 PROTEIN 6 418 IPR046958 -
Mupr12016g00001 420 ProSitePatterns Protein kinases ATP-binding region signature. 121 143 IPR017441 GO:0005524
Mupr12016g00001 420 ProSiteProfiles Protein kinase domain profile. 115 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12016g00001 420 SUPERFAMILY Protein kinase-like (PK-like) 96 382 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12016g00001 Mupr-Chr12016 3845 6651 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12016g00001 103 392 Receptor kinase-like Gene Family AT1G53420 39.527 9.13e-65 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mupr12016g00001 Pkinase 2.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12016g00001 - - gmx:100780587 739.569