Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12012g00004 ATGGATGATCTTTCGTCAAGCCTTCTTTGCCAAGAAAACGAGACGTGTTTGGAAGAATTGGAATACCCATTGGTTGAGTCAGAGCATGATTGTGGGGTTTCGGAGGATGAGCGTGTGGGAATTTTGATTGAGAGAGAGATCGTTCTTGGGTTCAAAAGGGACGAAAGTTTGGTGTTTGGGGACTGGGTGAAACGATCGCGCATGGAAGCAATCAATTGGATTCTCAAAACAAGAGCAACATTGGGTTTTCGCTTCGAAACGGCTTATTTGTCAGTCACATACTTGGATCGATTCCTTTCCAGACGGTCCATTGATAGTGAAAAGTGTTGGGCAATTCGGTTGCTATCAATTGCATGCCTCTCTCTTGCTGCAAAGATGGAGGAGTGCAATGTGCCGGGGCTATCAGAATTCAAATTGGACGATTATTCCTTTGAGGGAAAAATGATTCAGAAAATGGAGCTTTTGGTGCTCACCACATTGGAGTGGAGAATGGGTATCCTCACTCCCTTTGATTTTCTCTCTTATTTTATCACAAAGTTCTGCAAACAATCCCCGCCGAGTCCCATTTTTTCCAAGACCATGCAACTCATCTTCACCACAATGAAAGAGGTCAATTTAATGGATCACAAACCATCAGTTATTGCCGCGGCTGCTACGCTAGTGGCAATGGATCAACAATTGACGATAGAAGAGGTGGGGTTGAAGATGAGTTCAATTCCACAGCATAGGCTTCTAGAACCTAAAGATGTATTTGAGTACTACAATCTAATTCAAAGATTATACGAGGAGAATACCAAAAGAGACATGCATACGCCAATTGACATGACAGAGAGCTCTCGAGTTACTTCTGCAGCAATGGCAAAGAGAAGAAGACTCACATTCAGTGATGGTGGAGGAAGTGAGAAACCAGCAAGGAAAAGAGGAACAAAGGAGGAAGCAAGAATAAAAGTTGAGTTCAGGCCTTCATTGCCTCTTCATAACGGATTTTGTTTTGTCATATCTCTTGCAACCTACCTTTTGATGGATGCTTGGGATGGATACTTTAGTAATGTCTTCAAAAAGGCTGAAAGCGGGCGAGAAAACTCTGTTGGTGGTCAACTTGAAGTCCATGAGAAATTATTGGTGTCAGCGGTCAAAGTGGTATTTCTACTGAACAAGCTGCATAGGAGAAGCATCTTGGATGCAGTGGATCATGGTTGA 1200 0.43 MDDLSSSLLCQENETCLEELEYPLVESEHDCGVSEDERVGILIEREIVLGFKRDESLVFGDWVKRSRMEAINWILKTRATLGFRFETAYLSVTYLDRFLSRRSIDSEKCWAIRLLSIACLSLAAKMEECNVPGLSEFKLDDYSFEGKMIQKMELLVLTTLEWRMGILTPFDFLSYFITKFCKQSPPSPIFSKTMQLIFTTMKEVNLMDHKPSVIAAAATLVAMDQQLTIEEVGLKMSSIPQHRLLEPKDVFEYYNLIQRLYEENTKRDMHTPIDMTESSRVTSAAMAKRRRLTFSDGGGSEKPARKRGTKEEARIKVEFRPSLPLHNGFCFVISLATYLLMDAWDGYFSNVFKKAESGRENSVGGQLEVHEKLLVSAVKVVFLLNKLHRRSILDAVDHG 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12012g00004 399 ProSitePatterns Cyclins signature. 67 98 IPR006671 -
Mupr12012g00004 399 FunFam Cyclin-D5-1 62 165 - -
Mupr12012g00004 399 Pfam Cyclin, N-terminal domain 65 164 IPR006671 -
Mupr12012g00004 399 SUPERFAMILY Cyclin-like 150 239 IPR036915 -
Mupr12012g00004 399 SUPERFAMILY Cyclin-like 30 164 IPR036915 -
Mupr12012g00004 399 MobiDBLite consensus disorder prediction 294 311 - -
Mupr12012g00004 399 FunFam Cyclin-D5-1 166 254 - -
Mupr12012g00004 399 Gene3D - 166 226 - -
Mupr12012g00004 399 PANTHER CYCLINS 42 258 IPR039361 -
Mupr12012g00004 399 MobiDBLite consensus disorder prediction 292 311 - -
Mupr12012g00004 399 Gene3D - 64 165 - -
Mupr12012g00004 399 Pfam Cyclin, C-terminal domain 168 267 IPR004367 -
Mupr12012g00004 399 CDD CYCLIN_AtCycD-like_rpt2 168 257 - -
Mupr12012g00004 399 SMART cyclin_7 72 158 IPR013763 -
Mupr12012g00004 399 CDD CYCLIN_AtCycD-like_rpt1 67 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12012g00004 Mupr-Chr12012 30846 34134 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12012g00004 8 239 Core Cell Cycle Gene Families AT4G37630 34.940 2.29e-40 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12012g00004 K18811 - gmx:100798728 527.709