Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12006g00001 ATGGCTGATCATCAGCAGGGAGATCAACCTTCTTCATCCAAAGGGATCGAAAGAAAGATTGAAAGGGCATTATCACGTGCTGATCAAATAGACACGGCTATCAACTACATCAAGAACCTAGAGACAAAGGTGAAGATGGCGCAGGAGAAGAAACAAAGCTTAATGGAAAGGAAGAAGAGATCTCGTTGTGACAGTTCTCAAGCACCAAAAATTGAGATTCATGAAATGGGTTCCTCGCTTCAAATCATTCTGACGTGTGGCTTTGATTACCACTTCATTTTCAGTGAAATTATTCGCATACTACATGGAGACAACATAGAGGTCAAGAGTTTCCATTCTTCACTCGCTGGAAACTCAATGTTGCATATTGTGCACGCACAAATTCAGGAATCCTTTCAACTAGAAACAATCGCAACGACTATTGAAAGATTGAAAAGGTTTGTGAACGGACATAGAGAAGATTTTAAGGATTTCCCCCATTTTTTT 486 0.3992 MADHQQGDQPSSSKGIERKIERALSRADQIDTAINYIKNLETKVKMAQEKKQSLMERKKRSRCDSSQAPKIEIHEMGSSLQIILTCGFDYHFIFSEIIRILHGDNIEVKSFHSSLAGNSMLHIVHAQIQESFQLETIATTIERLKRFVNGHREDFKDFPHFF 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12006g00001 162 Coils Coil 30 64 - -
Mupr12006g00001 162 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 24 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12006g00001 Mupr-Chr12006 625 1565 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12006g00001 23 150 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 29.167 6.34e-13 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12006g00001 - - pvu:PHAVU_005G102700g 161.77