Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1199g00005 ATGATGCCCCCTCAGCAAGAAACCGCTATTACACCTAACGTTCCGGCCATCCCCAACCGGCCGGAAAACAGCTCCGTCCACGCTGAACCACCTAGCTCCGCCACCAATGACATTAAACCCACTTTGATCACCAATGACATTGACAACAATAATTCTCAGCACCACCCAGCTCCTTCAGCAGCCAAATTTTCAATTCTTCACCAGTCTCTCCGCCCCGTTACCCTCAAATTTGAGGATGTTTCCTACAGCATAACCTTTGGAAGGGACAAGAATGGTTGTGTGTCTTCTCAAAAGCCAAAGCTCACAAGGACAGTGCTGAATGGTGTGACCGGCATGGTGGGGCCCGGAGAGGTGATGGCAATGCTGGGTCCCTCAGGGAGCGGCAAGACCACCTTACTGACAGCCCTCGCCGGCCGTCTCGGCGGAAAACTCTCCGGCGCCATCACATACAACGGCCACCCGCTCTCCAGCTCCATGAGGCGAAACATAGGGTTTGTATCCCAAGACGAAGTGTTGTACCCTCACCTCACCGTGCTCGAGACTCTAACCTACGCTGCCATGTTGAAACTTCCCAAGAGTTTGACTAGGGAAGAGAAAATGGAGCAAGCTGAAATGATAGTTGTAGAACTAGGGCTGTCTCGGTGCCGGAACAGTCCCGTTGGTGGTGCCACCGCCTTGTTCCGGGGGATTTCCGGCGGAGAGAGGAAGCGGGTTAGCATCGGGCAAGAGATGTTGGTGAACCCGAGTTTGTTGTTGTTAGACGAACCCACTTCTGGGTTGGATTCCACCACGGCCCAGCACATCGTAGCGACGCTGCAGAGCCTCGCCCGCTGTGGCCGGACCGTGGTGACCACCATTCACCAGCCTTCGAGTAGGCTGTATTGGATGTTTGATAAGGTGGTAGTGTTGTCCGACGGGTATCCGATTTTCACCGGGCAAACGGGTCGGGTCATGGATTATCTCGACTCCATTGGGTTTGTACCCGCTTTCAATTTCATGAACCCGGCTGATTTTCTGCTTGACCTTGCTAATGGCATAGTTGCTGATGTCAAACAGGATGAGCAGATAGAGAACTACCATGAGGATCAAGCTTCAATAAAACAGTTCCTAGTTTCATCCTATAAGAAAAACTTATACCCTCTTCTCAAACATGAGGTCCAGCAGAATCATAGAGACCTAGCATTTTTCACTTCAGGAACACCTAGAAGTTCTGAGAACCAATGGACCACTAGCTGGTGGGAGCAATTCATGGTTCTGCTTAAGAGGGGTTTAAAGGAGAGGAGGCATGAATCTTATTCAGGCTTAAGGATTTTCCAAGTCTTGTCTGTATCAATTCTCTCCGGACTTTTGTGGTGGAATTCTGATCCCTCACATGTACAAGACCAGGTAGGCCTGCTATTCTTCTTCTCCATCTTCTGGGGGTTCTTCCCCCTCTTCAATGCCATCTTTGCTTTTCCTTTGGACCGGCCAATGCTGATGAAAGAACAATCATCAAGCATGTACCATCTCTCCTCCTACTATGTTGCAAGGATGGTAGGGGACTTACCAATGGAGCTTGTGCTTCCTACCATCTTTGTAACTATCTCTTATTGGATGGGTGGTCTCAAGCCTTCTTTGGTCACATTTGTGTTAACCCTCTTGATCATGCTTTTCAATGTGTTGGTCTCTCAAGGAATAGGCCTAGCACTTGGGGCAATTCTAATGGATGTCAAACAGGCCACAACCTTAGCATCAGTGACTATGTTGGTGTTTCTTTTGGCTGGGGGCTACTACATTCAGCAAATGCCATTCTTTATAGCTTGGTTGAAGTACATTTCTTTCAGTCACTACTGCTATAAGCTTCTTGTAGGAGTGCAGTACTCGGTAAGTGAGGTCTATGAGTGTGGACCAGGGTTACATTGTAGGATAAGAGATTTTCCTGCCATAAAGTGTCTAGGGCTTGATAGTTTGTGGGGAGATGTGGCTGTATTGAGTAGTTGTGGCTTATCTAGCTTTGAGGATGGGGCTGCATCATTGACTAGAGACTTCATAGTAGATCAAGGATTCAGGGCCATAATATTGATTCACACCTTTGGTGTTTGGATCGTTGCCTCTGTTTAA 2100 0.4852 MMPPQQETAITPNVPAIPNRPENSSVHAEPPSSATNDIKPTLITNDIDNNNSQHHPAPSAAKFSILHQSLRPVTLKFEDVSYSITFGRDKNGCVSSQKPKLTRTVLNGVTGMVGPGEVMAMLGPSGSGKTTLLTALAGRLGGKLSGAITYNGHPLSSSMRRNIGFVSQDEVLYPHLTVLETLTYAAMLKLPKSLTREEKMEQAEMIVVELGLSRCRNSPVGGATALFRGISGGERKRVSIGQEMLVNPSLLLLDEPTSGLDSTTAQHIVATLQSLARCGRTVVTTIHQPSSRLYWMFDKVVVLSDGYPIFTGQTGRVMDYLDSIGFVPAFNFMNPADFLLDLANGIVADVKQDEQIENYHEDQASIKQFLVSSYKKNLYPLLKHEVQQNHRDLAFFTSGTPRSSENQWTTSWWEQFMVLLKRGLKERRHESYSGLRIFQVLSVSILSGLLWWNSDPSHVQDQVGLLFFFSIFWGFFPLFNAIFAFPLDRPMLMKEQSSSMYHLSSYYVARMVGDLPMELVLPTIFVTISYWMGGLKPSLVTFVLTLLIMLFNVLVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYIQQMPFFIAWLKYISFSHYCYKLLVGVQYSVSEVYECGPGLHCRIRDFPAIKCLGLDSLWGDVAVLSSCGLSSFEDGAASLTRDFIVDQGFRAIILIHTFGVWIVASV 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1199g00005 699 MobiDBLite consensus disorder prediction 1 58 - -
Mupr1199g00005 699 Pfam ABC-2 type transporter 287 352 IPR043926 GO:0140359
Mupr1199g00005 699 Gene3D - 75 323 IPR027417 -
Mupr1199g00005 699 Pfam ABC transporter 106 258 IPR003439 GO:0005524
Mupr1199g00005 699 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 103 323 IPR027417 -
Mupr1199g00005 699 ProSitePatterns ABC transporters family signature. 230 244 IPR017871 GO:0005524|GO:0016887
Mupr1199g00005 699 SMART AAA_5 115 308 IPR003593 GO:0016887
Mupr1199g00005 699 FunFam ABC transporter G family member 22 93 324 - -
Mupr1199g00005 699 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 75 330 IPR003439 GO:0005524
Mupr1199g00005 699 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 51 656 - -
Mupr1199g00005 699 Pfam ABC-2 type transporter 414 620 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1199g00005 Mupr-Chr1199 17533 22152 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1199g00005 105 306 Calmodulin-binding Proteins AT2G36910 32.057 1.05e-13 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1199g00005 K05681 - gmx:100797574 1173.3