Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11980g00005 ATGAACGACGCAGATGTCTCCAAGCAAATCCAGCAGATGGTCAGGTTTATCCGCCAGGAAGCCGAAGAGAAAGCCAACGAGATCTCTGTCTCCGCCGAAGAAGAATTCAACATCGAGAAGTTGCAGTTAGTTGAAGCCGACAAGAAGAAGATCCGCCAAGAGTACGAGCGCAAAGAGAAGCAAGTTGAAATTCGGAAGAAGATTGAGTACTCTATGCAGTTGAATGCTTCTCGGATAAAAGTTCTTCAAGCTCAAGATGATGTGATTAATAACATGAAAGAAGCAGCATCGAAGGAACTTTTGCACGTGAACCATGATAATCATGTGTACAGGCACCTTTTAAAAGACCTCATTGTTCAGAGTTTGCTGAGGCTGAAAGAGACTTCTGTCTTATTGCGATGTCGGAAAGATGATGTGCATTTGGTAGAGGATGTGTTGGATTCAGCTGCACAAGAATATGCTGAAAAGGCAAATGTTGATCCACCGGAGATCCTTGTTGACAACATCCATCTTCCTCCTGCTCCCAGCCACTATAATTCCCATGAACCCTACTGGTAA 558 0.4409 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEADKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDVINNMKEAASKELLHVNHDNHVYRHLLKDLIVQSLLRLKETSVLLRCRKDDVHLVEDVLDSAAQEYAEKANVDPPEILVDNIHLPPAPSHYNSHEPYW 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11980g00005 185 Gene3D - 92 177 IPR038495 -
Mupr11980g00005 185 Pfam ATP synthase (E/31 kDa) subunit 16 168 IPR002842 GO:0033178|GO:0046961|GO:1902600
Mupr11980g00005 185 SUPERFAMILY V-type ATPase subunit E-like 87 160 - -
Mupr11980g00005 185 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 180 IPR002842 GO:0033178|GO:0046961|GO:1902600
Mupr11980g00005 185 Coils Coil 41 61 - -
Mupr11980g00005 185 Gene3D - 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11980g00005 Mupr-Chr11980 27360 29849 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11980g00005 1 185 Primary Pumps ATPases(2) AT1G64200 71.354 2.00e-91 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11980g00005 K02150 - gmx:111064655 314.309