Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11980g00001 ATGGAAAGCATTTGGTGGTTGATGTCCTTGGTGGTGGTGGCTCTGATACTATGTCAAGCAAATGCAGATAGCATTGAGGAAAAGCGAGCATTGCTTGAGTTGGTAGAAAAGTTGCCTCCATCGAGGCCTCTGAATTGGAACGCAGGGTCATCTCCGTGTAGGTCATGGACGGGTATAACCTGTAACGGAGACAAGTCAAGAGTTATAGCCATTCGGTTGCCAGGGTTTGGCTTCCACGGAACCATCCCTCCAAACACAATTAGCCGCTTGACTTCTCTCCAAACACTCAGTCTCAGATCCAACTTCATAACCGGCCATTTCCCTTCTGATTTTTCCAACCTCACTAACCTTTCCTTTCTCTACATTCAATTCAATAACTTCACTGGTCCCTTACCTGACTTCTCTGCTTGGCGTAACCTCTCCGTTGTTAACCTCTCCAATAATTTCTTCACCGGCCCCATTCCTCTCTCCCTCTCCAATTTGCCTCACCTTTCCTCCATCAATCTCGCCAACAACTCCCTTTCCGGTGAAATCCCTCTTTCTCTCCAGAGGTTTCCCAACTCGGCATTCCTAGGAAACAATGTCTCTCTTCAAACCTCTAAATCTGTTAAACACGGCCAAACTTCTGTGTTTTGGGTTATTGTTGCCGCTGCCGTTCTCGGCCTCGCTGCATTTCTTGTTTTAATCTTCGTTTTCTGCTCCAGAAATAAGACTGGGAATGCCTTTGCTCGGAAGTTGCACAAGGGAGATATGTCTCCGGAGAAAGTTGTGTCCAGAGACATTGATGCGAATAATAAACTTGTTTTCTTCGAGGGGTGTAGTTACGCTTTTGACTTGGAGGATTTGTTGAGGGCTTCTGCGGAGGTATTGGGGAAGGGGACGTTTGGTGCTGCGTACAAGGCTGCGCTGGAGGATGCCACCACTGTTGTTGTCAAGAGGTTGAAAGATGTGGCTGTTGGAAAGAGGGACTTTGAGCAGCACATGGAGGTTGTTGGGGATCTTAAACATGACAATGTGGTTCAGCTAAAAGGTTATTACTACTCCAAAGATGAGAAACTCATGGTCTATGATTACTACTCTCAGGGGAGTCTCTCTGCTCTCTTGCATGGCAAAAGAGGAGAGGATAGGGTTCCTTTAGATTGGGATACTCGGATGAAAATTGCTTTGGGTGCTGCACGGGGCATTGCTAGGATCCATTCCGAGAATGGTGGGAAACTTGTACATGGCAATATCAGATCCTCAAATATCTTTCTGAATAGTAAACAGTATGGTTGCGTATCTGATCTTGGGCTGGCAAGCATAATGAGCTCAGTTGCCATACCCATATCGCGAGCTGCTGGTTACAGAGCACCTGAAATTACAGACACGAGGAAAGCGACACAAGCTTCTGATGTTTTCAGCTTTGGTGTGGTGTTACTAGAGCTTCTGACTGGGAAATCCCCTGTGTACACAACTGGTAGCGATGAGATTGTGCACTTGGTGAGATGGGTTCATTCGGTTGTGAGAGAGGAGTGGACAGCTGAAGTTTTTGACTTAGAGCTGATCAGATATCCCAATATAGAGGAAGAGATGGTGGAAATGCTGCAGATAGCCATGTCATGTGTGGTAAGGGTTCCTGATCAGAGGCCCAAAATCTCACAAGTTGTAAAAATGATAGAAAATGTCAGGCTGGTTGTTGATACACTGAATCAGCAGCCATCATCTGAGAACCAAGCGGAAAGTGCAACACAATCCCCTTTAACCACTTAA 1749 0.462 MESIWWLMSLVVVALILCQANADSIEEKRALLELVEKLPPSRPLNWNAGSSPCRSWTGITCNGDKSRVIAIRLPGFGFHGTIPPNTISRLTSLQTLSLRSNFITGHFPSDFSNLTNLSFLYIQFNNFTGPLPDFSAWRNLSVVNLSNNFFTGPIPLSLSNLPHLSSINLANNSLSGEIPLSLQRFPNSAFLGNNVSLQTSKSVKHGQTSVFWVIVAAAVLGLAAFLVLIFVFCSRNKTGNAFARKLHKGDMSPEKVVSRDIDANNKLVFFEGCSYAFDLEDLLRASAEVLGKGTFGAAYKAALEDATTVVVKRLKDVAVGKRDFEQHMEVVGDLKHDNVVQLKGYYYSKDEKLMVYDYYSQGSLSALLHGKRGEDRVPLDWDTRMKIALGAARGIARIHSENGGKLVHGNIRSSNIFLNSKQYGCVSDLGLASIMSSVAIPISRAAGYRAPEITDTRKATQASDVFSFGVVLLELLTGKSPVYTTGSDEIVHLVRWVHSVVREEWTAEVFDLELIRYPNIEEEMVEMLQIAMSCVVRVPDQRPKISQVVKMIENVRLVVDTLNQQPSSENQAESATQSPLTT 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11980g00001 582 MobiDBLite consensus disorder prediction 563 582 - -
Mupr11980g00001 582 FunFam pollen receptor-like kinase 1 253 358 - -
Mupr11980g00001 582 Gene3D Ribonuclease Inhibitor 24 204 IPR032675 -
Mupr11980g00001 582 PANTHER OS05G0588300 PROTEIN 6 568 - -
Mupr11980g00001 582 SMART serkin_6 284 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr11980g00001 582 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 359 566 - -
Mupr11980g00001 582 Gene3D Phosphorylase Kinase; domain 1 251 358 - -
Mupr11980g00001 582 SUPERFAMILY L domain-like 37 195 - -
Mupr11980g00001 582 FunFam Probable inactive receptor kinase RLK902 24 183 - -
Mupr11980g00001 582 Pfam Protein tyrosine and serine/threonine kinase 288 551 IPR001245 GO:0004672|GO:0006468
Mupr11980g00001 582 SUPERFAMILY Protein kinase-like (PK-like) 288 564 IPR011009 -
Mupr11980g00001 582 ProSiteProfiles Protein kinase domain profile. 284 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr11980g00001 582 Gene3D Transferase(Phosphotransferase) domain 1 359 577 - -
Mupr11980g00001 582 ProSitePatterns Protein kinases ATP-binding region signature. 290 321 IPR017441 GO:0005524
Mupr11980g00001 582 Pfam Leucine Rich Repeat 139 161 IPR001611 GO:0005515
Mupr11980g00001 582 Pfam Leucine rich repeat 81 127 IPR001611 GO:0005515
Mupr11980g00001 582 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11980g00001 Mupr-Chr11980 4342 6848 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11980g00001 16 579 Receptor kinase-like Gene Family AT4G23740 60.097 0.0 720
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mupr11980g00001 PK_Tyr_Ser-Thr 5.5e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11980g00001 - - gmx:100783234 920.998