Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11958g00001 ATGGGCGACATGAAAGACAAGATGAAGGGGTTCATGAAGAAAGTCAACAACCCTTTCTCCTCTTCATCATCTGGCAAATTCAAGGGCCAAGGTAGAGTCCTCGGTTCTTCTTCTTCTTCTTCGACACCCACTAATTCCAATCCTACCCCTCGCCCCATTCCCACACAGAATCCTAATCCTAATCCTAATCCCAAACCCAAACCCAAACCCACTTCAGCCACAGCCAATCCCAAACCCTTGCCCCAGAAAATGGAGGAGCCCAATAGAATCACCGAGAAGCCTCGCAAAGATGATGGCTTTGACCCTTTTGATTCTTTGCTCACTAATTCCAAGAGATCTCAAAATGGGTATTCTCTTAACGTGTATGAATGCCCCGTTTGTAAACAACCCTTTAGATCCGAAGAAGAGGTTGCTGCGCACGTGGATGATTGTTTGAGTAACCCTGTTGAGCGTGGAGGTGATAATGGCAATGGGTTCTCAGAGAGTGAAGTTGAGTCTAATAGTGAATTGGAGGTTTGTGTTGGGACTTACATTTCAGGGAAGCCATCTGAGGGATCGGTTGATGTTGTTCTCAAACTGTTGAGGAATATTGGTAGGGAACCGGAGAATGTGAAGTTCAGGAGGATCAGGATGAACAATCCCAAGATAAAAGAGGCTGTTGGTGATGTTGCAGGGGGAATTGAGATGCTGAGTTTCGTGGGGTTTGAACTTAGGGAGGAGAGTGGAGAGACATGGGCAGTGATGGAGGTTCCCACACAGAACCAAATAAACTTCATTAAAAAAGCAATAGTGTTGCTGGAATCTCAACTTGTACAAGGACCTCCAAAGAGAGAGGATTCGGCGCCTGCAACTTCTGCCCAGATGGGTGCAAAGGCTGAACCAAAGCCCGTCGACAGACAGCTGGAGCGGGGTGGCCACTATGGCGCTCCTGGGTGGTTTTGCATCCACAATGCTGAAAGCAAAGTGAAGGTCTTCTTTGCTGTCCCTGAAAGCGTTGCAGCTAAAATTGAGCTACCAGATTCCTTCTATAATCTTTCAGCCGAAGAGGTGAGAAGAGAAGCTGAATTAAGGAGAAAAAAGATTGCAGATTCTCAGCTTTTAATCCCCAAGTCTCTTAAAGAAAAGCAAGCAAAAGCTTCCATGAGGAGATACACAAAAGCTATCATTAGGATTCAGTTTCCAGATGGAGTTGTACTTCAAGGTGTATTTGCTCCATGGGAATCAACTACTGCTCTCTACGAGTTTGTGAGCTCAGCATTAAAAGAACCATGTTTGGAATTTGAGTTAATGCATCCTGTACTTGTCCAACGGCGTGCGATCCCTCATTTTCCAAAAGCAGGGGAAAATGCTAAAACAATAGAGGAAGAGAACCTGGTACCTTCTGCTCTAATCAAGTTCAAGCCCCTCGAAACAGATTCTGTAGTTTTCACCGGTCTCAAAAATGAATTGCTTGAAATCAGTGAACCTCTCGCGAGTTAA 1479 0.453 MGDMKDKMKGFMKKVNNPFSSSSSGKFKGQGRVLGSSSSSSTPTNSNPTPRPIPTQNPNPNPNPKPKPKPTSATANPKPLPQKMEEPNRITEKPRKDDGFDPFDSLLTNSKRSQNGYSLNVYECPVCKQPFRSEEEVAAHVDDCLSNPVERGGDNGNGFSESEVESNSELEVCVGTYISGKPSEGSVDVVLKLLRNIGREPENVKFRRIRMNNPKIKEAVGDVAGGIEMLSFVGFELREESGETWAVMEVPTQNQINFIKKAIVLLESQLVQGPPKREDSAPATSAQMGAKAEPKPVDRQLERGGHYGAPGWFCIHNAESKVKVFFAVPESVAAKIELPDSFYNLSAEEVRREAELRRKKIADSQLLIPKSLKEKQAKASMRRYTKAIIRIQFPDGVVLQGVFAPWESTTALYEFVSSALKEPCLEFELMHPVLVQRRAIPHFPKAGENAKTIEEENLVPSALIKFKPLETDSVVFTGLKNELLEISEPLAS 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11958g00001 492 Gene3D - 376 469 - -
Mupr11958g00001 492 MobiDBLite consensus disorder prediction 1 111 - -
Mupr11958g00001 492 FunFam UBX domain-containing protein 6 376 467 - -
Mupr11958g00001 492 ProSiteProfiles UBX domain profile. 382 466 IPR001012 GO:0005515
Mupr11958g00001 492 SUPERFAMILY PUG domain-like 183 268 IPR036339 -
Mupr11958g00001 492 Gene3D Classic Zinc Finger 118 149 - -
Mupr11958g00001 492 FunFam Plant UBX domain-containing protein 2 179 265 - -
Mupr11958g00001 492 CDD PUB 178 268 - -
Mupr11958g00001 492 Pfam PUB domain 184 256 IPR018997 -
Mupr11958g00001 492 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 2 1 301 - -
Mupr11958g00001 492 SMART PGNneu 185 252 - -
Mupr11958g00001 492 MobiDBLite consensus disorder prediction 15 46 - -
Mupr11958g00001 492 MobiDBLite consensus disorder prediction 274 297 - -
Mupr11958g00001 492 SUPERFAMILY Ubiquitin-like 354 466 IPR029071 -
Mupr11958g00001 492 Gene3D - 180 266 - -
Mupr11958g00001 492 MobiDBLite consensus disorder prediction 85 102 - -
Mupr11958g00001 492 MobiDBLite consensus disorder prediction 47 75 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11958g00001 1 414 C2H2 Transcription Factor Family AT2G01650 52.619 2.21e-139 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr11958g00001 PUB 8.5e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11958g00001 K14011 - gmx:100779271 680.633