Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11956g00003 ATGTTGAGGTTGATATTAAAAGAGAATTGTGAGGTAGCATTCTTGGGAGTCCCTTTCACGTGGTTTTGGATTTGGGACCCCACACCACAATCCGTAAAAAACGCGTTTAAGTGGGAGAAGATAACTATTCAAATTCAACCAACACAAAGTTTAGAGTTTTGGTTTGTGTTGAGATTGGCACGTGACATGTCAGCGGCGTCGCCGTCTCCGGCGTCATCCTCGGCTGCGCCCCCGCCCTCCTCCAACAACACTAGTCCCTCACCCTCCACCTCCACCCCCACCCCCACCACTCCACCTCTGCAACAACCCCCTTCTTCCCCTTCTCCGCCGCCAACAACCCCTCCTCCGGCGGCTCCGCCGTCACCGCCACCGCCACCTAGGTCTCCGCCTCCCTCCGTTTCTGGAACCTCCCCTCCCTTAGCACCTCCACCATCACCCCCTCTATCACCACCACCATCTTCTCCGGCAGCGCCGCCACCGAGTAGCTCTCCACCGCCGCCACCACCATTAGCACCAGTTCCATCAAGAAGCCCTTCACCACCGTCACTACCATCAAACCCTCCTGACAACACATCACCACCACCGCCACCACAACCATCAGCTCCACCACCTAACAACACTTCAACGCCGCCACCACCACCACCACAATCAAATTCACCACCTCCCCCGGCCACCACGCTGCCACCGTCCCCGCAAAATTTACCACCTCCTCCGGCTGCACCGCCCTCCAGAAACACCACTCGGTCACCCCCGCCGGTTAATTCACCACCACCACCGGGGGCTGTGCCGCCACAGAGGTCATCGCCGCCACCAGCACCAGCACCATCCACCCCTCCTTCTAGGATTAGTCCTCCTCCCACACCAAGTTCTCAACAAGCTCCACCTTCAAATTCTACACCAAATTCATCACCTCCGTCACCACCTTCAAATTCTACACCAAATTCATCACCTCCGTCACCACCTTCAAGTACTCAATTGGTCCCACCTCCCCCATCACGAGTTTCAACGCCGCCACAGAATGGGACAGAAAACTCTAGCCCTGGTGGAGGTGGGGGAGGAATTGGCATTGGTGGTGTAGTGGGTATTAGTGTGGCTGCAATTCTGCTGCTAGGCTTCATTGGTGTTTTTATATGGTGCACGAAGAGGCAAAAAAAGAAGGTACCTGTGAATGGTGGTTATGTCATGCCATCCAATCTTGTCTCATCTCCTGATTCAGATTCATCCTTTTTGAAGACACACTCCTCAGCTCCTCTGGTACAAAGTGGCTCTGGCAGTGATGCTGTGTACACACCATCTGACCCTGGTGGATTAGGCCATTCAAGGTCATGGTTTTCATATGAAGAACTAATCAAGGCCACGAATGGTTTCTCAACTCAAAATCTTTTGGGTGAGGGTGGGTTTGGCTGTGTGTATAAAGGACACCTTCCTGATGGGAGAGAGATAGCAGTCAAACAGCTGAAGATTGGTGGAGGGCAGGGGGAGAGAGAATTCAAAGCTGAGGTGGAAATCATCAGTCGCATACATCATCGCCATTTGGTTTCTCTAGTGGGATATTGCATTCAAGATAGTAGAAGACTTCTTGTCTATGACTATGTCCCTAACAATACCCTTTATTTTCATCTACATGGGGAAGGTCAGCCTGCGCTAGAATGGGCAAACCGTGTTAAAATTGCAGCCGGTGCAGCCCGGGGAATAGCTTATCTCCATGAAGACTGCAATCCTCGGATCATTCACAGGGATATCAAGTCATCAAACATTCTTTTGGATTACAATTATGAAGCTAGGGTCTCAGATTTTGGGCTAGCCAAATTGGCTCTTGACGCAAATACACATATAACCACACGTGTCATGGGAACTTTTGGGTATGTTGCCCCTGAATATGCGTCAAGTGGCAAATTGACTGAGAAGTCTGATGTATATTCTTTTGGAGTAGTGCTTTTGGAGCTCATTACAGGACGAAAACCAGTAGATGTATCCCAACCTTTGGGAGATGAGAGCCTAGTTGAATGGGCTCGACCTTTGCTGAGTCATGCAATCGATACTGAGGAATTCGATAGTTTGGCAGATCCAAGGCTAGAAAAGAATTATGTTGAGAGTGAATTGTATTGCATGATTGAAGTTGCTGCTGCTTGTGTGCGGCACTCAGCTGCAAAGAGACCACGCATGGGACAGGTTGTTAGAGCTTTTGATAGCTTAGCAGGTTCAGATCTAACTAACGGAATGCGACTTGGGGAAAGTGAGGTGTTTGACTCTGCGCAGCAATCCGAAGAAATAAGATTATTTCGGAGGATGGCATTTGGTAGTCAAAATTATAGCACAGACTTCTTTAGCCATGCTAGTTTGAATCCATGA 2352 0.5009 MLRLILKENCEVAFLGVPFTWFWIWDPTPQSVKNAFKWEKITIQIQPTQSLEFWFVLRLARDMSAASPSPASSSAAPPPSSNNTSPSPSTSTPTPTTPPLQQPPSSPSPPPTTPPPAAPPSPPPPPRSPPPSVSGTSPPLAPPPSPPLSPPPSSPAAPPPSSSPPPPPPLAPVPSRSPSPPSLPSNPPDNTSPPPPPQPSAPPPNNTSTPPPPPPQSNSPPPPATTLPPSPQNLPPPPAAPPSRNTTRSPPPVNSPPPPGAVPPQRSSPPPAPAPSTPPSRISPPPTPSSQQAPPSNSTPNSSPPSPPSNSTPNSSPPSPPSSTQLVPPPPSRVSTPPQNGTENSSPGGGGGGIGIGGVVGISVAAILLLGFIGVFIWCTKRQKKKVPVNGGYVMPSNLVSSPDSDSSFLKTHSSAPLVQSGSGSDAVYTPSDPGGLGHSRSWFSYEELIKATNGFSTQNLLGEGGFGCVYKGHLPDGREIAVKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIQDSRRLLVYDYVPNNTLYFHLHGEGQPALEWANRVKIAAGAARGIAYLHEDCNPRIIHRDIKSSNILLDYNYEARVSDFGLAKLALDANTHITTRVMGTFGYVAPEYASSGKLTEKSDVYSFGVVLLELITGRKPVDVSQPLGDESLVEWARPLLSHAIDTEEFDSLADPRLEKNYVESELYCMIEVAAACVRHSAAKRPRMGQVVRAFDSLAGSDLTNGMRLGESEVFDSAQQSEEIRLFRRMAFGSQNYSTDFFSHASLNP 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11956g00003 783 SUPERFAMILY Protein kinase-like (PK-like) 437 727 IPR011009 -
Mupr11956g00003 783 MobiDBLite consensus disorder prediction 91 336 - -
Mupr11956g00003 783 ProSitePatterns Serine/Threonine protein kinases active-site signature. 576 588 IPR008271 GO:0004672|GO:0006468
Mupr11956g00003 783 Gene3D Transferase(Phosphotransferase) domain 1 532 743 - -
Mupr11956g00003 783 SMART serkin_6 456 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr11956g00003 783 MobiDBLite consensus disorder prediction 66 90 - -
Mupr11956g00003 783 ProSitePatterns Protein kinases ATP-binding region signature. 462 484 IPR017441 GO:0005524
Mupr11956g00003 783 Gene3D Phosphorylase Kinase; domain 1 436 531 - -
Mupr11956g00003 783 FunFam Proline-rich receptor-like protein kinase PERK8 429 531 - -
Mupr11956g00003 783 MobiDBLite consensus disorder prediction 404 427 - -
Mupr11956g00003 783 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 367 764 IPR047117 -
Mupr11956g00003 783 ProSiteProfiles Protein kinase domain profile. 456 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr11956g00003 783 CDD STKc_IRAK 462 732 - -
Mupr11956g00003 783 FunFam proline-rich receptor-like protein kinase PERK8 532 743 - -
Mupr11956g00003 783 Pfam Protein tyrosine and serine/threonine kinase 458 727 IPR001245 GO:0004672|GO:0006468
Mupr11956g00003 783 MobiDBLite consensus disorder prediction 65 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11956g00003 Mupr-Chr11956 14327 19146 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11956g00003 444 729 Receptor kinase-like Gene Family AT5G56890 55.172 2.33e-100 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Mupr11956g00003 PK_Tyr_Ser-Thr 4.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11956g00003 - - gmx:100794393 814.683