Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11947g00001 ATGAACATGGATATGTGCCAAAATGTATCAGTTTCCAGTGAGTGCCAACAAGAGCAGATCCTTGCCCCTTCTTGCTCAAGCAGCCTTGATGACCTTTTCTCTGCTCAGAACACGGAAGTGGATGTTGAGTTGGAGTGGCTTTCAGTGTTTGTTGAAGACTGTTTTTCAAGCCCCCCAAGCTGTGTCTTGGTACCTGCTAGTGTTCAGACTACAAGCAGCAACCCTTCAGGCACATTGAAGAGACCCCAACAAAATGAGTCTCCTTTGCAAAATTTTGCTGTGCCTGGGAAGGCCAGGAGCAAAAGGAAAAGGCTTTCAGCCCCTAGAACCAAGGACCCCTTAAGCATCTGGTCACACCATTTGAACCCCCAAAATGAGGCCTTGAGTTCTGACCCCCCTCTACTCAAACAGGCTTATTGGTTGGCTGACAGTGAACTCATTATGCCTAAGCCAAAGGAGGAGCAAGAGGTGACCAAAGAGGATGCACAATTGGTGGAGAAGGGGATTGTCATTGTGAGCAAGGAAAGCTTTGAGGACTCTGACCTTGAGGGTGGCAATGGTCAACATCCAATGCCAAGGAGGTGCACCCATTGCCTGGCTCAGAGGACCCCACAGTGGAGGGCAGGACCATTAGGTCCAAAGACACTATGCAATGCATGTGGAGTCAGGTACAAGTCTGGTAGGTTGCTACCAGAGTATAGACCAGCCAAGAGTCCTACTTTTGTAAGCTACTTGCACTCCAATTCCCACAAGAAAGTCATGGAGATGAGGATGGCTGTTTACTCTTCTATTTCTAGTGACCAGAACAAACTATTTGGAAACAGAGATACTATTAAGGGGAGTGACAACAACGACGTGAATTTTGTTCCACTGGGTATCGCATATATGGGAAACAGTTTTCTCAAGAAATTCTTGTCGCTGCGTTCCTCTTCTCCACTCTATTATATTCTATCCTCTTTGGAGGAGAAACACCAAACT 978 0.4683 MNMDMCQNVSVSSECQQEQILAPSCSSSLDDLFSAQNTEVDVELEWLSVFVEDCFSSPPSCVLVPASVQTTSSNPSGTLKRPQQNESPLQNFAVPGKARSKRKRLSAPRTKDPLSIWSHHLNPQNEALSSDPPLLKQAYWLADSELIMPKPKEEQEVTKEDAQLVEKGIVIVSKESFEDSDLEGGNGQHPMPRRCTHCLAQRTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRMAVYSSISSDQNKLFGNRDTIKGSDNNDVNFVPLGIAYMGNSFLKKFLSLRSSSPLYYILSSLEEKHQT 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11947g00001 326 FunFam GATA transcription factor 186 271 - -
Mupr11947g00001 326 MobiDBLite consensus disorder prediction 68 91 - -
Mupr11947g00001 326 MobiDBLite consensus disorder prediction 68 117 - -
Mupr11947g00001 326 CDD ZnF_GATA 194 241 IPR000679 GO:0006355|GO:0043565
Mupr11947g00001 326 ProSitePatterns GATA-type zinc finger domain. 195 220 IPR000679 GO:0006355|GO:0043565
Mupr11947g00001 326 SMART GATA_3 189 243 IPR000679 GO:0006355|GO:0043565
Mupr11947g00001 326 PANTHER GATA TRANSCRIPTION FACTOR 22 260 - -
Mupr11947g00001 326 ProSiteProfiles GATA-type zinc finger domain profile. 189 225 IPR000679 GO:0006355|GO:0043565
Mupr11947g00001 326 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 190 253 - -
Mupr11947g00001 326 Gene3D - 185 258 IPR013088 GO:0006355|GO:0008270
Mupr11947g00001 326 Pfam GATA zinc finger 195 229 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11947g00001 Mupr-Chr11947 12516 14627 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11947g00001 42 257 C2C2-Gata Transcription Factor Family AT4G32890 42.222 3.71e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mupr11947g00001 GATA 1.5e-14 CL0167