Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11931g00002 ATGGTTGAATTGGAAATTCAGGTCCCAACCCCATTCGACCCATTTGCAGAAGCAAGAGAATCTGATGCTCCGGGAGCGAAGGAGTATGTGCACATTCGCATTCAGCAGAGGAATGGGAAGAAGAGTTTGACCACAGTTCAAGGGCTGAAGAAGGCATTCAGCTACGAGAAGATCCTAAAGGATCTGAAGAAGGAGTTTTGCTGTAACGGGAATGTGGTGCAGGACAAGGAACTTGGCAAGATAATCCAACTCCAAGGGGACCAGCGCAAGAACGTTTCTCACTTTCTTGTTCAAGCTGGCCTCGTCAGGAAGGACCAGATCAAGATTCATGATCCGTTAGGTAGTAGCATAACCAATTAA 360 0.4694 MVELEIQVPTPFDPFAEARESDAPGAKEYVHIRIQQRNGKKSLTTVQGLKKAFSYEKILKDLKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSHFLVQAGLVRKDQIKIHDPLGSSITN 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11931g00002 119 Pfam Translation initiation factor SUI1 27 100 IPR001950 GO:0003743|GO:0006413
Mupr11931g00002 119 Gene3D - 1 111 - -
Mupr11931g00002 119 FunFam Eukaryotic translation initiation factor SUI1 2 112 - -
Mupr11931g00002 119 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 8 110 - -
Mupr11931g00002 119 ProSiteProfiles Translation initiation factor SUI1 family profile. 30 100 IPR001950 GO:0003743|GO:0006413
Mupr11931g00002 119 NCBIfam translation initiation factor SUI1 5 110 IPR005874 GO:0003743
Mupr11931g00002 119 CDD eIF1_SUI1 28 110 IPR005874 GO:0003743
Mupr11931g00002 119 PIRSF Transl_init_SUI1_Euk 1 112 IPR005874 GO:0003743
Mupr11931g00002 119 SUPERFAMILY eIF1-like 4 111 IPR036877 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11931g00002 Mupr-Chr11931 10686 11398 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11931g00002 1 110 Eukaryotic Initiation Factors Gene Family AT5G54940 82.727 9.11e-67 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11931g00002 K03113 - gmx:100791423 216.853