Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11926g00005 ATGGCGCTTAGTCTTTTCTGTTGTCTTCTTGTTATCACCTTGATTTTCATGCAAACTCTGGCAGATAATTCATGCACCGATTGTTTCACTCATTCTCGGGCAGCATATTATCCAAATTCAGAAGAACACGGAACAGATGTAGGTGCATGTGGATTTGGTTCCTTTGGTGCTACAGTCAATGGCGGGGATGTATCAGCTGCATCTTTTCTTTATCGGAATGGTGTTGGTTGTGGCGCATGTTACCAGGTGAGGTGTACCAACAGTGCCTATTGCTCAGACAACGGTGTGACCGCAGTTATAACTGACCAAGGTTCAAGTGATAACACTGATTTCATTCTTAGCAAACATGCGTTTAGCCGGATGGCTCTAACCACTGATGCAGCTGCTTCTCTATTAGCCCTTGGTGTGGTTGATATTGAATATAGACGTGTTGCATGCAGCTACCCATATAAAAACATAACATTCAAGATAGATGAGAGCAGCAACAACCCTTATTACTTGGCTTTTGTCATTTGGTATCAACAAGGAAGGAGAGACATAACTGCTGTGCAGCTCTGTGAGACTCAAAACTTTGTGTGCAAGTTACTGGATCGGAGCCATGGGGCGGTGTGGACTACTACCTCTCCACCAAGTGGACCTTTGTCTATAAGAATGTTGTTTAGTGATGAAGAAGAAGAGGGAGAAGAAACGTGGGTTGTTCCTGTTAATAACATACCCGGAGACTGGAAGGCTGGAGAAACATACGATTCAGGGGTACAAAAACGTACCCTTCAAAGCAAACAGATCTTAAGTTCAAGTTCACGTCAACCACGTCTTCTTGTTTTGTGGAAGATAGTGTTTCCATTCCAGATTTAA 855 0.4327 MALSLFCCLLVITLIFMQTLADNSCTDCFTHSRAAYYPNSEEHGTDVGACGFGSFGATVNGGDVSAASFLYRNGVGCGACYQVRCTNSAYCSDNGVTAVITDQGSSDNTDFILSKHAFSRMALTTDAAASLLALGVVDIEYRRVACSYPYKNITFKIDESSNNPYYLAFVIWYQQGRRDITAVQLCETQNFVCKLLDRSHGAVWTTTSPPSGPLSIRMLFSDEEEEGEETWVVPVNNIPGDWKAGETYDSGVQKRTLQSKQILSSSSRQPRLLVLWKIVFPFQI 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11926g00005 284 Gene3D - 150 254 IPR036749 -
Mupr11926g00005 284 SUPERFAMILY PHL pollen allergen 151 250 IPR036749 -
Mupr11926g00005 284 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 165 250 IPR007117 -
Mupr11926g00005 284 Pfam Lytic transglycolase 69 141 IPR009009 -
Mupr11926g00005 284 Pfam Expansin C-terminal domain 153 223 IPR007117 -
Mupr11926g00005 284 CDD DPBB_EXLB_N 30 146 - -
Mupr11926g00005 284 SUPERFAMILY Barwin-like endoglucanases 20 149 IPR036908 -
Mupr11926g00005 284 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 47 151 IPR007112 -
Mupr11926g00005 284 Gene3D - 17 147 IPR036908 -
Mupr11926g00005 284 PRINTS Expansin/Lol pI family signature 134 150 IPR007118 GO:0005576
Mupr11926g00005 284 PRINTS Expansin/Lol pI family signature 236 250 IPR007118 GO:0005576
Mupr11926g00005 284 PRINTS Expansin/Lol pI family signature 46 64 IPR007118 GO:0005576
Mupr11926g00005 284 PANTHER EXPANSIN-B3 14 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11926g00005 Mupr-Chr11926 27353 31317 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11926g00005 11 252 Expansin Gene Family AT4G17030 41.463 7.66e-58 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11926g00005 - - gmx:100794009 481.87