Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11924g00001 ATGGTAAGAATTTCTATATGGATAGCATTTGCCACATCCCTTTTCCTCCTAAACAAGACCAATTGTGTGGAGTATGAGGTGAAGAGAACACTGATACAATTTCTGGCACAAGTCTCTGGTAATGATAGCCAACATAACTCCACTTTGGTTTGGAAACAAGACTCTGATCCCTGCAAGGATCTTTGGCAAGGTGTATATTGTGATCCTCAAAATATGTCTATAAAGAGGTTGTTACTTGATAGGCTCAATTTGTCTGGAACACTTGATGTTGCTATGCTTTGCAACTTGCAGTCCCTGGCTGCATCTCTCACATTTCTTAGCCTTGATGGCAACCAAATTAGTGGGATGATAGCATCTGAGATTGGAAAGTGCAAACAACTCACTCGCCTACACCTAAGTGGAAACCAACTTGCTGGAGACCTTCCTAGTTCACTTGCCATGCTATACAATTTGAAGAGACTAGACATTTCGAATAACGAGCTTTCGGGTCCTTTGCCAGACTTGTCTAGAATCTCAGGGCTGAACATGTTCCTTGCACAAAACAATCACCTTAGAGGAACCATACCCGCCTTTGATTTCTCCAATTTTGACCAATTCAATGTCTCCTTCAACAATTTCAGGGGCCACATTCCAAACGTGCATGGCTATTTCTCTGCTGATAGCTTCCTTGGTAATCCTGAACTATGTGGAGATCCACTACCAAAAAACTGTTCTGGTAAACCTATGCCTCTTAGTGAGGCTCAGGCATCAGAAGAATCAAAGGGTTCTTCTAAGGAGCAGATTCTTATGTACTCAGGCTATGCTGCACTGGGTGTTGTCATTGTCCTTTTTGTAGTCTTAAAGCTGTGTAGAAGAAAGAAAATTGAAGCATTGAATGGGGTAGTGGCAACTGATGGTGGTGTTGAAAAGCCCAGCAATGTTTCAAGTGAAAACAAAGTTGAGGTAAGCAGATCTGAGTTTTCAGTCACTGCTGAAAGTGGAACGGTTTCACAATCACTAATAGTTCTTTCAAGGCCAGCGGCAATTGAATTGAGATTGGAGGACTTGTTGAAGGCCCCTGCGGAATTGATTGGCAGAGGAAAGAATGGAAGTCTTTATAAGGTGATGCTTGACAATGGGATAATGGTGGTTGTGAAAAGGATCAAGGATTGGTCTATTTCAAGCCATGATTTCAAGCAAAGAATGCAAATACTGAGTCAGGCAAAGCACCCTCGTGTTCTGTCACCTCTTGCTTTCTATTGTTCCAAACATGAGAAGCTTTTGGTGTATGAATATCAGCAAAATGGAAGTTTATTCAAGCTTCTACATGGTACCCCAAAAACCTTTGACTGGACCAGCAGACTTGGGATAGCAGCTACAATTGCTGAGGCATTAGCTTTCATGCATCAAGAGCTGGGCCATCATGGTATTATTCATGGTAACCTGAAATCCTCCAACATTATGCTAAACAAGAATATGGAGCCATGTATAAGTGAATATGGTGTTATAGCTATGGATGATGAAAGGGGTTCACCTTTTGCCAGTCATTTTGATGCTGGTTCATTAGATATCTTAAAGGGAGATGTTTATGGCTTTGGTGTGATTCTTCTGGAATTGCTTACTGGCAAGTTAGTGAAGAGCAACGGGATTGACTTGCCTGATTGGGTTCAGTCAGTTGTGAGGGAAGAATGGACAGGTGAAGTCTTTGACAGGTCTCTAATATCAGAGTATGCAAGTGAAGAGAGGATGGTCAATTTGCTTCAGGTGGCTATAAGATGTGTCAATCGTTCACCAGAGGCTAGGCCAAGCATGAACCAAGTTTCTCTCATGATTAACACTATCAAAGAGGACGAAGAAAAATCCTTGATTTATGAAGTGTGA 1860 0.4177 MVRISIWIAFATSLFLLNKTNCVEYEVKRTLIQFLAQVSGNDSQHNSTLVWKQDSDPCKDLWQGVYCDPQNMSIKRLLLDRLNLSGTLDVAMLCNLQSLAASLTFLSLDGNQISGMIASEIGKCKQLTRLHLSGNQLAGDLPSSLAMLYNLKRLDISNNELSGPLPDLSRISGLNMFLAQNNHLRGTIPAFDFSNFDQFNVSFNNFRGHIPNVHGYFSADSFLGNPELCGDPLPKNCSGKPMPLSEAQASEESKGSSKEQILMYSGYAALGVVIVLFVVLKLCRRKKIEALNGVVATDGGVEKPSNVSSENKVEVSRSEFSVTAESGTVSQSLIVLSRPAAIELRLEDLLKAPAELIGRGKNGSLYKVMLDNGIMVVVKRIKDWSISSHDFKQRMQILSQAKHPRVLSPLAFYCSKHEKLLVYEYQQNGSLFKLLHGTPKTFDWTSRLGIAATIAEALAFMHQELGHHGIIHGNLKSSNIMLNKNMEPCISEYGVIAMDDERGSPFASHFDAGSLDILKGDVYGFGVILLELLTGKLVKSNGIDLPDWVQSVVREEWTGEVFDRSLISEYASEERMVNLLQVAIRCVNRSPEARPSMNQVSLMINTIKEDEEKSLIYEV 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11924g00001 619 ProSitePatterns Protein kinases ATP-binding region signature. 357 379 IPR017441 GO:0005524
Mupr11924g00001 619 Gene3D Phosphorylase Kinase; domain 1 318 425 - -
Mupr11924g00001 619 Pfam Protein kinase domain 355 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr11924g00001 619 PANTHER OS05G0588300 PROTEIN 10 609 - -
Mupr11924g00001 619 SUPERFAMILY L domain-like 48 215 - -
Mupr11924g00001 619 SUPERFAMILY Protein kinase-like (PK-like) 355 603 IPR011009 -
Mupr11924g00001 619 Gene3D Ribonuclease Inhibitor 26 195 IPR032675 -
Mupr11924g00001 619 FunFam Leucine-rich repeat receptor protein kinase EMS1 94 191 - -
Mupr11924g00001 619 Gene3D Ribonuclease Inhibitor 196 240 IPR032675 -
Mupr11924g00001 619 Gene3D Transferase(Phosphotransferase) domain 1 427 618 - -
Mupr11924g00001 619 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Mupr11924g00001 619 ProSiteProfiles Protein kinase domain profile. 351 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr11924g00001 619 Pfam Leucine Rich repeats (2 copies) 125 169 IPR025875 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11924g00001 Mupr-Chr11924 838 3370 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11924g00001 10 608 Receptor kinase-like Gene Family AT3G08680 33.742 1.86e-90 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mupr11924g00001 Pkinase 1.9e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11924g00001 - - gmx:100813796 1048.11