Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11913g00006 ATGGACATGGACGTAGACGAAACTTCTGCACCCAAAGAGGGAAAGACCGTTTTGGTGATCTTGGTGGGAGCACCGGGTAGCGGGAAGTCTACCTTCTGCGAAGATGTTATGAGTTCCTCTACACGCCCTTGGGTTCGCGTTTGCCAGGACACTATTGCAAATGGTAAAGCAGGAAATAAAGCTCAGTGCCTAAGCAGTGCAGATAGAGCATTGAAGGATGGGAAGAGTGTATTCATTGATAGGTGCAATCTTGACAAAGAACAGCGTTCAGAATTTATAAAGCTTGGTGGTGGACCCCAAATAGATGTCCATGCAGTTGTACTTGACCTTCCTGCTAAGCTTTGTATTTCTCGATCTGTCAAACGATCTGGGCATGAAGGTAATTTGCAGGGTGGAAAAGCTGCTGCAGTTGTGAATAGAATGCTTCAAAATAAAGAGCTTCCCAAATTAAGTGAAGGCTTTAACCGGATAACATTTTGTCAGAATGAGAGTGATGTCAAAAATGCTATTAATACATACAGCACACTTGGGCCACTGGATAGTCTTCCACATGGCTGCTTTGGCCAGAAGAATCCAGATTCCAAAATTCAAGTTGGTATAATGAAGTTCCTAAAAAAAGCAGAGGTCCCACTTGCTGCTACATCTAGAGAGTGTGGCATTGGAGACCCTACTTCCCAGACTCCAGGGAAAAATAATTCCTGCAGCAAAGATAAGGAAACACTTTCCTCAATTCCAGATAATGCCAACATAGAGACAAAGGAAGTAGAAGGCCAAGCAGGTGGCTCTGCTGGTTCCCATGCCAGTCAAGTTTCCCTGGATGATATTCCCACTTTGGCATTTCCATCTATTTCAACATCTGATTTTCAATTCAACCATGAGAAGGCATCTGATATTATTGTTGAGAAGGTTGCAGAGTTCTCAAATAAGTTTAGGAATGCCAGACTTGTTCTGGTTGACTTGTCTCATAAATCAAAGATTCTGTCCTTAGTTAAAGCCAAATTGGTAGGAAAAAACATTGACAACCAAAAGTTCTTTACCCATGTTGGGGACATTACTCACCTTTATTCCAGGGGAGGTTTGCGCTGTAATGTCATAGCTAATGCTGCCAACTGGCGGTTGAAACCTGGAGGTGGAGGTCCTGAACTGGAGTCTGCAACAAAAGAAAAAGTAAAATCTCTTTGGCCTGGGAATGCTGCTGTTGTTCCTCTACCTTCATCTTCTCCTTTGTTCACCAGAGAGGGTGTAACCCATGTAATACATGTTCTTGGACCTAATATGAACCCACAAAGACCAAATTGTCTAAATAATGATTATAATAAAGGCTGCAAAATTCTCCAAGATGCTTATACTTCACTGTTTGAAGGTTTTGCATCAATTGTGAGGAACCAGCCACGACAACCAGTGGGAAAAAATGAAAACCTTGAAAGAAAGTCTTTGGAGTTGCCGGTTCAGTCTGATTATTCCAGAAATCATTTCACAAATACTGATCAAAAGAGTAAGAGAGATGCTGATCATGGATCAGAAAAAAACAAGAAATACAAGGGGACTCAGGATGGCTTTGGATTGACCTTTACTGATTCTAGAGATGAAAAGGTAGATTCAGAGCATAGAAGAACTGAGGGGAGCAAGAGTAAGGCATGGGGATCATGGGCCCAAGCTCTTCACCAAATAGCTATGCATCCTGAAAAGCATAAGGGTGATTTGCTTGAAATTTCCGAAGATATTGTTGTATTGAATGATGTGTACCACAAGGCACAGAAGCATGTTCTGGTGTTGTCACGAACTGGGGGTCTTGATTGCCTGGCTGATGTCCAAGAGGAGCACCTTCATTTATTGAAGAAGATGCATGATGTGGGTTTAAAGTGGGCTGAGAAGTTCTTGAACGAGAATGATTCTCTCGTATTTCGTCTTGGATATCACTCGGCACCATCAATGCGACAACTACATTTACATGTTATTAGCCAGGACTTCGATTCAACACATTTAAAGAATAAGAAGCACTGGAACTCGTTTAACACTGCTTTCTTTCGCGACTCAGTAGATGTAATGGATGAGATATCTAGACATGGGAAGGCAACATTGAAAGATGATGACAAGGTACTTTCTATGGAGTTGAGGTGCCACAGATGTAGAAGTGCGCATCCAAACATACCTCGGTTAAAATCACATATTGGCAGTTGTCAATCACCCTTTCCTGCTTTCCTACTTCAAAACGGACGTTTGGTTCATGCACCAGGGGAACCTCGTAACAATATCCTGTAG 2262 0.4222 MDMDVDETSAPKEGKTVLVILVGAPGSGKSTFCEDVMSSSTRPWVRVCQDTIANGKAGNKAQCLSSADRALKDGKSVFIDRCNLDKEQRSEFIKLGGGPQIDVHAVVLDLPAKLCISRSVKRSGHEGNLQGGKAAAVVNRMLQNKELPKLSEGFNRITFCQNESDVKNAINTYSTLGPLDSLPHGCFGQKNPDSKIQVGIMKFLKKAEVPLAATSRECGIGDPTSQTPGKNNSCSKDKETLSSIPDNANIETKEVEGQAGGSAGSHASQVSLDDIPTLAFPSISTSDFQFNHEKASDIIVEKVAEFSNKFRNARLVLVDLSHKSKILSLVKAKLVGKNIDNQKFFTHVGDITHLYSRGGLRCNVIANAANWRLKPGGGGPELESATKEKVKSLWPGNAAVVPLPSSSPLFTREGVTHVIHVLGPNMNPQRPNCLNNDYNKGCKILQDAYTSLFEGFASIVRNQPRQPVGKNENLERKSLELPVQSDYSRNHFTNTDQKSKRDADHGSEKNKKYKGTQDGFGLTFTDSRDEKVDSEHRRTEGSKSKAWGSWAQALHQIAMHPEKHKGDLLEISEDIVVLNDVYHKAQKHVLVLSRTGGLDCLADVQEEHLHLLKKMHDVGLKWAEKFLNENDSLVFRLGYHSAPSMRQLHLHVISQDFDSTHLKNKKHWNSFNTAFFRDSVDVMDEISRHGKATLKDDDKVLSMELRCHRCRSAHPNIPRLKSHIGSCQSPFPAFLLQNGRLVHAPGEPRNNIL 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11913g00006 753 Pfam AAA domain 18 146 - -
Mupr11913g00006 753 MobiDBLite consensus disorder prediction 493 515 - -
Mupr11913g00006 753 MobiDBLite consensus disorder prediction 524 543 - -
Mupr11913g00006 753 FunFam Transcription factor bHLH140 324 461 - -
Mupr11913g00006 753 MobiDBLite consensus disorder prediction 219 248 - -
Mupr11913g00006 753 MobiDBLite consensus disorder prediction 216 248 - -
Mupr11913g00006 753 Gene3D - 549 729 IPR036265 -
Mupr11913g00006 753 SUPERFAMILY Macro domain-like 325 454 IPR043472 -
Mupr11913g00006 753 SUPERFAMILY HIT-like 547 711 IPR036265 -
Mupr11913g00006 753 ProSitePatterns HIT domain signature. 636 654 IPR019808 -
Mupr11913g00006 753 Gene3D Leucine Aminopeptidase, subunit E, domain 1 329 460 IPR043472 -
Mupr11913g00006 753 MobiDBLite consensus disorder prediction 464 544 - -
Mupr11913g00006 753 FunFam Transcription factor bHLH140 6 175 - -
Mupr11913g00006 753 Pfam C2HE / C2H2 / C2HC zinc-binding finger 672 724 IPR032566 -
Mupr11913g00006 753 Pfam Scavenger mRNA decapping enzyme C-term binding 557 667 - -
Mupr11913g00006 753 Gene3D - 3 175 IPR027417 -
Mupr11913g00006 753 FunFam aprataxin isoform X2 548 728 - -
Mupr11913g00006 753 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 161 IPR027417 -
Mupr11913g00006 753 PANTHER APRATAXIN-RELATED 278 727 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11913g00006 7 742 C2H2 Transcription Factor Family AT5G01310 57.909 0.0 843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11913g00006 K10863 - gmx:100786762 1329.69