Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11897g00001 ATGGGTTTGGGGTGTGTCACGGTGGAGCCTCTTCTGTTATTGTTAACAGTATTATGCGCTCTTGTTCCCACGCCAATGGCTGTAAGCTTTCGGTGTTGGGAAAGAAGCACGTGCGGAGCGTTGGTTGGTTACAGGTCGCAAGTTCCAACCACCTTAGGGGCCATCCAAAGCCTCTTCAACGTGACTCGTGTCGCAGACATTCTTGCCGCTAACGGCCTCCCAGAGTGGACCCTAGCCAACAATTTCATGGTGGAGGAGACTCGGGTTATGCGGATCCCGTTTGAGTGCGACTGCAGTGGGCCCGGGTTGTATGGCCAGCCCACTAACCCGCCGTTGTACAGGGTACGGACGGGTGATAATATTTCTTATATAATAACGTCGGTATTCTCGGGTTTGGTTGGTTCAACGGATATCCAATCCGGGAATAACATGACTAACTTGGACAGTTTGAAGACCGGACAAGAACTGCGAATGCCACTGCCTTGCAGCTGTGGATTGGATGTGGTTCACTTTGGATTGACGCCAGAATACGGACGCACGTTGGAACAGATAGCTGATGAGTACAATGTTGACCTACACACCATACTGGCTGTGAACCAAGCTTCCACTCCCGATATCCTGCTCGGAAGGGCTTTGGATATTCCTCTCCCTGTTTGTTCCTCGTCGGTGAGAAAAGACTCATTGGACTACCCTTTGCTTGTTCCACATGGTTCTTATGTCTACACCGCAAATGGCTGTGTGAGATGCAACTGCGATGCTGCTAACAACTGGACATTATCATGCGAGCCATCCATGATTAAACCAACTAACTGGTCCACATGCCCATCTATGCAATGCGACAATTCAAGCAACATGCAAATTGGTAACACCACATATTCAAGTTCTCACAATCTTACAATTTGTGCCTACGCTGGTTATGGAAGTCAAACTATCTTCACTACTCTTGCAACAGTGTCTATTCACCCCGAAAGCAGGTGGTGGATATGGCTTATTGTGATAGCAGGAGTCACTGTTGTACTTATATCCTGTTACTTTTGCCGCATAACCTGGAGAAAATACAAGATAGAAGCTGACAGAAAAAAGCAGCAGAAGAAACTAATACAAGAACTTGGAGCCAGTAAGGTGGCTTCAACTTTAAATCACCAAACAAAGAGACACAACAAAGATGATAAGACTAACTATGAAGGGCAGATATTTAACTTTTCAAGCATTGCTGCTGCCACGGACAACTTTTCAGTTGCAAATAAGTTAGGAGAGGGTGGTTTTGGACCAGTTTATAAGGGGAAACTGCCTAATGGACAAGAAATAGCAATAAAGAGACTTTCTAGTGAATCAGGGCAAGGATTGGTGGAGTTCAAAAATGAAGCTAAACTTATAGCAAAATTGCAGCATACTAATTTAGTAAGGCTTTTGGGGTTCTGCATACAAAATGAAGAAAATATATTAATCTATGAGTACATGCCCAACAAAAGCTTAGACTTTCATCTCTTTGATTCTATGAGAAGTGAAACAATAGTTTGGGAGAAAAGATTCAGCATCATTGAAGGTATAGCTCATGGGTTGGTTTATCTCCATCATTTTTCAAGATTAAAAGTAATTCACCGAGACTTGAAAGCTAGCAACATATTACTTGATAATGAGATGAACCCAAAAATTAGTGATTTTGGCATGGCAAGAATATTTGATTTGAAAGGAACAGAAGAGAACACCAGAAGAATTGTTGGAACATATGGTTACATGTCTCCAGAGTATGCCATGAATGGCATCATCTCTGTGAAGACTGATGTGTTTAGCTTTGGAGTCCTAGTGCTCGAAATTGTAAGTGGGAAGAAAAATAATTCTCACCATCACTTTGATTATCCCCTCATCCTTATTGGATTTGTAATCCTTTTAACTTTTGTCAATAGTGTTCCACTGGGGCTCAACATTGTTAAGACGAGTTGGCATGCTTATATGCAGGCATGGCAACTCTGGAATGAAGGTAAAGGTGAGGAGTTAATAGATTCATCGATGCTCGAATCATGCCATAAGGATGAAGTACTGCGATGCATTCAAGTGGGCCTGTTATGTGTACAGGACCGCGCAGCAGATAGACCAAGCATGTTGGAAGTTGTTTCAATGCTTTCAAATGAAACGATCTTCCTCCCTACTCCTAAACAGCCTGCATATTTTACAGACTTAAGTGCAAATGAAACAAAAGCGTCACTAGGAAAACAAAAATCTGGTTCTATAAATGAAATTGGCATTTACTGGGGTCAAGACTCCAATGAGGGAAGCCTTAATGAAACATGTGCAACAGGAAAATACTCATTTGTTAACATAGCCTTCCTCTCCACATTTGGGAATGGCCAAACCCCTCAGCTCAACCTGGCAGGTCATTGTGACCCCTCTGCTAATGGGTGCACTGAGATTGGGAGAGAGATTAGGAATTGCCAAAAGCAAGGGATCAAGGTCATGCTCTCTATTGGAGGAGGAACTGACAGTTACGCTCTAACTTCTCTTGAGGATGCAAAAAATGTGTCGGATTATTTGTGGGACAATTTCCTGGGTGGTGCTTCCTCCTCGTCACGCCCACTTGGGGATGCAGTATTGGATGGCATTGACTTTGACATACAGGCAGAAGGTTTATCATTCCTGGGGAACCTTTCACGTTACCTCAGTTCACATTCAGATAAACACAAAGTCTACTTGTCAGCAGCACCTCAATGTCCATTTCCTGATGCTAACCTGGCTTCCGCCCTCGATACCGCCCTTTTCGACTATGTCTGGGTACAATTCTATAACAATCCTCCATGCGATTATACCAATCAAAATTTTAATAACTTTCTAAAATCATGGAACCAGTGGGCCACCTCATTGAAAAGAGGGAAAATATTTCTGGGGTTACCAGCAGATCCAGCTGCAGTTGTAAGCGGTTATGTTCCAGCTTATGTACTGATGTCTCGGATCTTACCTGCAATAAACAAGTCAACAAATTTTGGAGGTGTCATGTTGTGGTCAAGGTACTATGATAAATTGAGTGGATACACTACCGACATTCAAAATTTTCAGTTAAACCGAACAGCAAATCCTCTATGCACTCAGCAAAGCCTTCCCGCATGTAGGAGCCGTGACAGCGATTTCTTCGTGCAACGTGTTGGTAACATGTCCACTGTTGGTATCCAAGTTTATCAAGATGTCAACAATGCTACACAATGCTGTGAGATCATATGTAGGAACAACTGTTCATGTGATGCTTATGCTCCAATATATCACATTAACAATAGCGGATGCCAGATGTGGTTCAAAGGAACCAAATTCGTTAGTGCTTCTGGGCATATAGCACACCCAATCTACGTTTCTGTTGCACTGCTCCAACAAGAACATCCGGTCGACGTTGTTAAACACAAAGCAAAGAGGTGGTGGATATGGCTCATCGTTGGGATGGGAGCAGCCCTTGCAATACCTGTGATCTTCTATTTATGCCGTGCCTTGGCGAGAAAATACAAAGCAAAAGGTAACTACCGCATATTTAAGCATGTAAGACCTCTTCATAACTTACATTTTCATGTCACACCACCAGTGGAGAGAAAGAAGATGCAGGAGAAGATATTACATGACATTGGAGGTAATGCTATGCTTTCAATGGTGTATGGCAAAACCATAAAAAGTAAGAACAAGGGAAAGACAGGCAATGAGGTGGAAATATTCAGTTTTGAAACCATCGCTGCTGCCACAAACAATTTCTCAGCTGCTAATAAACTAGGAGAGGGTGGTTTTGGTCCTGTTTATAAGGGAACATTAAGTGATCAGCAAGAAGTAGCAATAAAGCGACTTTCTAAAAGTTCGGGACAGGGGCTAATAGAGTTTACGAATGAAGCCAAACTCATGGCCAAACTCCAACACACTAATCTTGGTTCTGCATCCAGAAAGATGAAAGAATATTGGTCTGAGTACATGTCTAACAAGAGCTTAGACTTCTACCTATTTGATTCAACTAGAAAAAATTTGCTAGACTGGGAAAAACGGTGGAATATCATTGGAGGCATTGCTCAAGGACTTCTATATCTTCACAAGTATTCAAGACTAATGGTGATACATCGGGACTTGAAAGCAAGCAATATATTGCTTGATCATGAGATGAATCCTAAAATCTCTGACTTTGGCATGGCTCGCATATTTGGTGTAAGAGCATCAGAAGAAAACACTAACAGAGTTGTTGAGTACGCAATAAATGGTGTTGTGTCCATCAAAACAGATGTGTTCAGCTTTGGTGTACTGCTACTAGAGATACTTAGTGGAAAGAAGAATAACAGTCGCTATCATTCGGATCGCCCACTCAGCCTCATAGGATGCAATGAAGTTTTGAGATGTATTCATATTGGCCTCTTGTGTGTACAAGATCAAGCGACAGATAGACCTACTGTGGTAGATATTGTTTCATTTCTATCAAATGATACAATCCAACTTCCCCAACCAAAGAAGCCAGCATTCTTCGTCAATGAGGTTGTGGAAGAGTCAAAGCTTCCTTACAGCAGGCAAGAACATCATTCCTTAAACGATGTGGTTATGGAATTCTGGCCAGAATTTCTTGCGAGCAGTACGGGTAAAGAGTTTGTAGCTGGAGGCTTTGGAGGCACTGCTGGCATAATCTCAGGTTATCCGTTAGACACGCTCCGTGTTTTACAACAAAACTCCAACAATGTCTCTGCCTTCACCATCCTTAGAAATCTCGTCGCCAAAGAAGGTCCCACTTCTCTCTACCGTGGCATGGCTGCACCTTTGGCCTCTGTTACTTTTCAGAACGCTATGGTTTTCCAAATTTATGCAGTTCTGTCGAGGGCGTTTAGCTCGTCAGTGTCTGTTAACGACCCTCCTTCATACAAGGGTGTTGCTTTAGGAGGATTTTGTTGTGGTGGTTTGCAGAGTATGTTGCTGTCCCCTGTTGAGTTAGTTAAAATTCGGCTTCAGCTTCAGAACACGGGGCAATGGACAGAAGCCCAAAAGGGTCCTTTAAGGGTGGCGAATAACATATGGAAAAGAGAGGGGTTTCGTGGCATTTATCGAGGACTCGGCATCACTATGCTGAGAGATGCACCTGCACATGGCCTCTACTTTTGGACATACGAATACGCGAGGGAGAAACTTCACCCAGGTTGCAGAAAAAGTTGTGAAGAGAGTTTGAATACTATGCTTGTGGCAGGAGGATTAGCCGGGGTTGTGAGCTGGGTTTTCAGTTACCCTTTAGACGTTATAAAGACAAGGTTGCAGGCTCAGACACTTTCTTCGTCGAAATACAACGGCGTTTTCGATTGCCTTCGAAAGAGCGTTCGAGTTGAAGGATACGTGGTGCTATGGCGGGGTTTAGGAACTGCGGTTGCTAGAGCTTTTGTAGTTAACGGTGCTATATTTTCTGCTTATGAGATCACTCTAAGGTGTCTCTTTGATAAATAA 5433 0.4303 MGLGCVTVEPLLLLLTVLCALVPTPMAVSFRCWERSTCGALVGYRSQVPTTLGAIQSLFNVTRVADILAANGLPEWTLANNFMVEETRVMRIPFECDCSGPGLYGQPTNPPLYRVRTGDNISYIITSVFSGLVGSTDIQSGNNMTNLDSLKTGQELRMPLPCSCGLDVVHFGLTPEYGRTLEQIADEYNVDLHTILAVNQASTPDILLGRALDIPLPVCSSSVRKDSLDYPLLVPHGSYVYTANGCVRCNCDAANNWTLSCEPSMIKPTNWSTCPSMQCDNSSNMQIGNTTYSSSHNLTICAYAGYGSQTIFTTLATVSIHPESRWWIWLIVIAGVTVVLISCYFCRITWRKYKIEADRKKQQKKLIQELGASKVASTLNHQTKRHNKDDKTNYEGQIFNFSSIAAATDNFSVANKLGEGGFGPVYKGKLPNGQEIAIKRLSSESGQGLVEFKNEAKLIAKLQHTNLVRLLGFCIQNEENILIYEYMPNKSLDFHLFDSMRSETIVWEKRFSIIEGIAHGLVYLHHFSRLKVIHRDLKASNILLDNEMNPKISDFGMARIFDLKGTEENTRRIVGTYGYMSPEYAMNGIISVKTDVFSFGVLVLEIVSGKKNNSHHHFDYPLILIGFVILLTFVNSVPLGLNIVKTSWHAYMQAWQLWNEGKGEELIDSSMLESCHKDEVLRCIQVGLLCVQDRAADRPSMLEVVSMLSNETIFLPTPKQPAYFTDLSANETKASLGKQKSGSINEIGIYWGQDSNEGSLNETCATGKYSFVNIAFLSTFGNGQTPQLNLAGHCDPSANGCTEIGREIRNCQKQGIKVMLSIGGGTDSYALTSLEDAKNVSDYLWDNFLGGASSSSRPLGDAVLDGIDFDIQAEGLSFLGNLSRYLSSHSDKHKVYLSAAPQCPFPDANLASALDTALFDYVWVQFYNNPPCDYTNQNFNNFLKSWNQWATSLKRGKIFLGLPADPAAVVSGYVPAYVLMSRILPAINKSTNFGGVMLWSRYYDKLSGYTTDIQNFQLNRTANPLCTQQSLPACRSRDSDFFVQRVGNMSTVGIQVYQDVNNATQCCEIICRNNCSCDAYAPIYHINNSGCQMWFKGTKFVSASGHIAHPIYVSVALLQQEHPVDVVKHKAKRWWIWLIVGMGAALAIPVIFYLCRALARKYKAKGNYRIFKHVRPLHNLHFHVTPPVERKKMQEKILHDIGGNAMLSMVYGKTIKSKNKGKTGNEVEIFSFETIAAATNNFSAANKLGEGGFGPVYKGTLSDQQEVAIKRLSKSSGQGLIEFTNEAKLMAKLQHTNLGSASRKMKEYWSEYMSNKSLDFYLFDSTRKNLLDWEKRWNIIGGIAQGLLYLHKYSRLMVIHRDLKASNILLDHEMNPKISDFGMARIFGVRASEENTNRVVEYAINGVVSIKTDVFSFGVLLLEILSGKKNNSRYHSDRPLSLIGCNEVLRCIHIGLLCVQDQATDRPTVVDIVSFLSNDTIQLPQPKKPAFFVNEVVEESKLPYSRQEHHSLNDVVMEFWPEFLASSTGKEFVAGGFGGTAGIISGYPLDTLRVLQQNSNNVSAFTILRNLVAKEGPTSLYRGMAAPLASVTFQNAMVFQIYAVLSRAFSSSVSVNDPPSYKGVALGGFCCGGLQSMLLSPVELVKIRLQLQNTGQWTEAQKGPLRVANNIWKREGFRGIYRGLGITMLRDAPAHGLYFWTYEYAREKLHPGCRKSCEESLNTMLVAGGLAGVVSWVFSYPLDVIKTRLQAQTLSSSKYNGVFDCLRKSVRVEGYVVLWRGLGTAVARAFVVNGAIFSAYEITLRCLFDK 1810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11897g00001 1810 ProSiteProfiles Protein kinase domain profile. 1242 1481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr11897g00001 1810 Pfam PAN-like domain 1058 1096 IPR003609 -
Mupr11897g00001 1810 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 487 716 - -
Mupr11897g00001 1810 Pfam LysM domain 113 159 IPR018392 -
Mupr11897g00001 1810 Pfam LysM domain 180 215 IPR018392 -
Mupr11897g00001 1810 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 1212 1302 - -
Mupr11897g00001 1810 FunFam Mitochondrial arginine transporter BAC2 1527 1810 - -
Mupr11897g00001 1810 FunFam Acidic endochitinase SE2 745 1017 - -
Mupr11897g00001 1810 CDD GH18_hevamine_XipI_class_III 745 1015 IPR045321 -
Mupr11897g00001 1810 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 267 732 - -
Mupr11897g00001 1810 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1526 1608 IPR018108 -
Mupr11897g00001 1810 PRINTS Mitochondrial carrier protein signature 1544 1558 IPR002067 GO:0055085
Mupr11897g00001 1810 PRINTS Mitochondrial carrier protein signature 1531 1544 IPR002067 GO:0055085
Mupr11897g00001 1810 PRINTS Mitochondrial carrier protein signature 1728 1750 IPR002067 GO:0055085
Mupr11897g00001 1810 PRINTS Mitochondrial carrier protein signature 1681 1699 IPR002067 GO:0055085
Mupr11897g00001 1810 Gene3D Phosphorylase Kinase; domain 1 1215 1300 - -
Mupr11897g00001 1810 Gene3D Phosphorylase Kinase; domain 1 384 486 - -
Mupr11897g00001 1810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 532 544 IPR008271 GO:0004672|GO:0006468
Mupr11897g00001 1810 SUPERFAMILY (Trans)glycosidases 746 1013 IPR017853 -
Mupr11897g00001 1810 Gene3D Transferase(Phosphotransferase) domain 1 1313 1487 - -
Mupr11897g00001 1810 Gene3D Transferase(Phosphotransferase) domain 1 487 714 - -
Mupr11897g00001 1810 SUPERFAMILY Mitochondrial carrier 1529 1801 IPR023395 -
Mupr11897g00001 1810 Pfam Protein tyrosine and serine/threonine kinase 1245 1473 IPR001245 GO:0004672|GO:0006468
Mupr11897g00001 1810 Pfam Protein tyrosine and serine/threonine kinase 413 612 IPR001245 GO:0004672|GO:0006468
Mupr11897g00001 1810 Gene3D Mitochondrial carrier domain 1529 1809 IPR023395 -
Mupr11897g00001 1810 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 745 1029 IPR001223 GO:0005975
Mupr11897g00001 1810 Gene3D Glycosidases 746 1017 - -
Mupr11897g00001 1810 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1619 1708 IPR018108 -
Mupr11897g00001 1810 Pfam Glycosyl hydrolases family 18 747 1001 IPR001223 GO:0005975
Mupr11897g00001 1810 SUPERFAMILY Protein kinase-like (PK-like) 397 727 IPR011009 -
Mupr11897g00001 1810 SUPERFAMILY Protein kinase-like (PK-like) 1227 1503 IPR011009 -
Mupr11897g00001 1810 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 376 486 - -
Mupr11897g00001 1810 CDD STKc_IRAK 417 708 - -
Mupr11897g00001 1810 SMART serkin_6 1242 1476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr11897g00001 1810 SMART serkin_6 411 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr11897g00001 1810 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1313 1446 - -
Mupr11897g00001 1810 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1719 1806 IPR018108 -
Mupr11897g00001 1810 Pfam Mitochondrial carrier protein 1724 1809 IPR018108 -
Mupr11897g00001 1810 Pfam Mitochondrial carrier protein 1527 1610 IPR018108 -
Mupr11897g00001 1810 Pfam Mitochondrial carrier protein 1626 1709 IPR018108 -
Mupr11897g00001 1810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1358 1370 IPR008271 GO:0004672|GO:0006468
Mupr11897g00001 1810 ProSiteProfiles Protein kinase domain profile. 411 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11897g00001 Mupr-Chr11897 2047 19794 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11897g00001 1517 1810 Antiporters AT1G79900 69.831 2.75e-128 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr11897g00001 Glyco_hydro_18 1.7e-23 CL0058