Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11896g00001 ACTCGAGTCCCAACTACCTTACGGGCCATCCAAACACTCTTCAACGTGACTCGCGTGACAGACATTCTCGCCGCCAACGGCCTACCCGAGTGGACCCTACCAAACAATTTCACGGTGGATGAGAGTCGGGTTGTGCGGATCCCGTTTGAGTGCGACTGCAATGGGCCTGGGCTGTATGGTGAGCCCACTAACCCCCCTGTTTACACGGTGCAAAGGGGGGATAATATTTCTTATATAGTAACGAGTGTGTTCTCGGGTTTGGTGGATTCAAAGGATATCCAAAAAGGGAACAACATGGAGAGTTTATTGGTGGGAGAAGAAGTGAGAGTGCTACTGCCTTGCAGCTGTGGGCAGGTGAACGGGGTGGACGTGGTCCACTTTGGATTGACGCGGGAAAACGGGCTCACCTTGGAACAGATAGCTGATGAGTACCATGTACCATTACAGACCATTAGGATTTCCAATCAAGCTACTAATCCTCGTCTTATGGCCGGCCACCCTTTGGATATTCCACTCCCAGTTTGTTCCTCGGTGGTGAGAAAAGACTCATTGGACTACCCTTTGCATGTTCCACATGGTTCTTATGTCTACACCGCAAATGGCTGTGTGAGATGCAACTGCGATGCTGCCAAAAACTGGAAATTATCATGTGAGCCATCCAAGCTTAAACCAACTAATTGGTCTACTTGCCCATCTATGCAATGTGACAATTCAAGCAACATGTACATTGGTGACACCACATATTCAAGTTCTCACAATCATGCAATCTGTGCCTACGCTGGTTATGGAACTCAAACTATCTTCACTACTCTTGCAGCAGAGTCTAATCCTTCCGGTTTAGTTCACGAACATGACACGAAAAGCAGATGGTGGATATGGTTTACCATGATAGGAGGAGTTATTGTTGTACTTATATTCTGCTACTTTTGCTGTATCATCTGGAGAAAATGCAAACTAGAAGCTGGCAGAAAAAAGAAGCAGAAGGAACTACTACAGGAAATTGGAGTCAGTACTGTGGCTTCCACTGTATATCACAAAACGAAAAGACACAGCAAAGGTGGCAAGGCCAACTATGAAATGCAGATATTTAACTTTCCAATCATTGTTGCTGCAACAGACAACTTTTCAGTTGCAAACAAGTTAGGACAGGGTGGCTTTGGACCTGTTTATAAGGGGGAACTTCCTGATGGGCAAGAAATAGCAATAAAGAGACTTTCTAGTAGATCAGGGCAAGGATTGGTGGAGTTCAAAAATGAGGCTGAACTTGTAGCAAAACTGCAGCATACTAATCTCGTAAGGCTTTTGGGGCTCTGCATACAAAATGAAGAAAATATATTAATCTACGAGTACATGCCCAACAAAAGTTTAGACTTTCATCTCTTTGATTCTAACAGAAGGGAAGCAATAGTTTGGGAGAAAAGATCCAAGATCATTGAAGGAATAGCTCATGGGTTGATTTATCTCCATCATTTTTCAAGATTAAAAGTGATTCACCGGGATTTGAAGGCTAGCAACATATTACTTGATTATGAAATGAACCCAAAAATTAGTGACTTTGGCATGGCAGTAATATTAGATATGCAAGCAGTAGAAGTGAAGGCAAAAAGAATTGTTGGAACATATGGTTATATGTCTCCGGAGTATGTCATAAAAGGCATTATCTCAACAAAGACTGATGTGTTTAGCTATGGAGTCCTAGTGCTTGAGATTATAAGTGGGAAGAAAAATAATTGTCGTTATCAGTCCGATTACCCCCTAAACCTTATTGGATCTGCATGGCAACTCTGGAATGAAGGTAAAGGTGTTGAGTTAATAGATTCATCAATGCTTGAATCATGCCGGACAGCTGAAGTATTGCGATGCATTCAGGTTGGCCTGTTATGTGTACAGGCCAATGCCGCAGATAGACCAAGCATGTTAGAAGTTTATTCAATGCTTGCACATGAAACTCTTTTCCTCCCTATCCCTAAACAGCCTGCATATTTTACTGACGCATGTGCATATGAAACAAATGCATTAGTAGGAAAACAAAAATCTTATTCCACAAATGAAGTGACAATTTCAGTTGGAATTGGATTGATATACAAAATGAAGAGATCGCAGAAGATGAGCACAAGGGTGATGTTGTTCCTCATCCTCCAACTACTTGAGCTGTCTGAAGCCGAACAGATTGGCATTTACTGGGGTCAAAACAGCGACGAGGGAAACCTTACTGAAGCATGTGCAACAGGAAAG 2235 0.4268 TRVPTTLRAIQTLFNVTRVTDILAANGLPEWTLPNNFTVDESRVVRIPFECDCNGPGLYGEPTNPPVYTVQRGDNISYIVTSVFSGLVDSKDIQKGNNMESLLVGEEVRVLLPCSCGQVNGVDVVHFGLTRENGLTLEQIADEYHVPLQTIRISNQATNPRLMAGHPLDIPLPVCSSVVRKDSLDYPLHVPHGSYVYTANGCVRCNCDAAKNWKLSCEPSKLKPTNWSTCPSMQCDNSSNMYIGDTTYSSSHNHAICAYAGYGTQTIFTTLAAESNPSGLVHEHDTKSRWWIWFTMIGGVIVVLIFCYFCCIIWRKCKLEAGRKKKQKELLQEIGVSTVASTVYHKTKRHSKGGKANYEMQIFNFPIIVAATDNFSVANKLGQGGFGPVYKGELPDGQEIAIKRLSSRSGQGLVEFKNEAELVAKLQHTNLVRLLGLCIQNEENILIYEYMPNKSLDFHLFDSNRREAIVWEKRSKIIEGIAHGLIYLHHFSRLKVIHRDLKASNILLDYEMNPKISDFGMAVILDMQAVEVKAKRIVGTYGYMSPEYVIKGIISTKTDVFSYGVLVLEIISGKKNNCRYQSDYPLNLIGSAWQLWNEGKGVELIDSSMLESCRTAEVLRCIQVGLLCVQANAADRPSMLEVYSMLAHETLFLPIPKQPAYFTDACAYETNALVGKQKSYSTNEVTISVGIGLIYKMKRSQKMSTRVMLFLILQLLELSEAEQIGIYWGQNSDEGNLTEACATGK 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11896g00001 745 SMART serkin_6 375 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr11896g00001 745 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 231 689 - -
Mupr11896g00001 745 CDD STKc_IRAK 381 646 - -
Mupr11896g00001 745 Gene3D Phosphorylase Kinase; domain 1 336 450 - -
Mupr11896g00001 745 ProSiteProfiles Protein kinase domain profile. 375 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr11896g00001 745 Pfam LysM domain 136 171 IPR018392 -
Mupr11896g00001 745 Gene3D Transferase(Phosphotransferase) domain 1 451 651 - -
Mupr11896g00001 745 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase CES101 isoform A 451 651 - -
Mupr11896g00001 745 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 339 450 - -
Mupr11896g00001 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 496 508 IPR008271 GO:0004672|GO:0006468
Mupr11896g00001 745 SUPERFAMILY Protein kinase-like (PK-like) 358 646 IPR011009 -
Mupr11896g00001 745 Pfam Protein tyrosine and serine/threonine kinase 377 644 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11896g00001 Mupr-Chr11896 51 6458 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11896g00001 363 661 Receptor kinase-like Gene Family AT4G23230 55.184 4.04e-115 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr11896g00001 PK_Tyr_Ser-Thr 4.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11896g00001 - - gmx:100811504 1156.74