Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11892g00004 ATGTGTGGCGGTGCCATCATCGCTGACTTCATACCCCGCCGTGGAGGCCGTCCCCTCACGGCCTCCGAGCTCTGGCCAAACTCATTCGGCAAGGACGATGACTTTGACTTCGATTACTCTCACATCGGTAACCAACAACAACCCTCCACTCTCAAAAGGTCCCAACCTCCCAAAGCTAGCGAGCAAGTGGAGAAGCCAGGGAAAAGGCAGAGGAAGAATCTGTACAGAGGGATTCGGCAGCGTCCCTGGGGCAAATGGGCCGCGGAGATTCGCGATCCTCGAAAAGGGGTTCGTGTCTGGCTTGGTACATTCAACACTGCGGAAGAAGCTGCAAGGGCCTATGATCGCGAGGCTCGAAAAATCCGTGGCAAAAAGGCCAAGGTCAATTTCCCCAATGAAGACGACGAATATTCCATTCGAACTCGTAATCCAATTCCACCCCAAAACCCTCCCCTGCTTCACCAACAATACCGTTGCAATGTCAATAATGCCCCTAAGAACCTCAGCTTCGAGTTCGGTTATGATCTCAACCTCGCTGGGGCATTTCCGTCCCACGTGGACGCTGTTGCTGTTTCCGGCGATGAAAATTCAGGATTAGCGTCGGGTTCGGAGGGTGCTTACTCGACGACGGAGTTCGTGGGCTCGGATCAGAATGGGAACTGTTATTTGGGTGGTGCGGTAATGGTGAAGGAGAAAGAGACAGGGGTGGTTGAACCTGAAGAGGAAAAGAACAAAGTGCAGGAGCTTTCCGAGGAACTCATGGCGTACGAGAACTACATGAAGTTTTATCAGATTCCGTACTATGATGGACAATCCACGCCACCGAGTGTTGTTCAGGAAAGCCTGGTCGGGGATCTCTGGAGTTTCGAATAA 873 0.5235 MCGGAIIADFIPRRGGRPLTASELWPNSFGKDDDFDFDYSHIGNQQQPSTLKRSQPPKASEQVEKPGKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDREARKIRGKKAKVNFPNEDDEYSIRTRNPIPPQNPPLLHQQYRCNVNNAPKNLSFEFGYDLNLAGAFPSHVDAVAVSGDENSGLASGSEGAYSTTEFVGSDQNGNCYLGGAVMVKEKETGVVEPEEEKNKVQELSEELMAYENYMKFYQIPYYDGQSTPPSVVQESLVGDLWSFE 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11892g00004 290 PRINTS Ethylene responsive element binding protein signature 97 113 IPR001471 GO:0003700|GO:0006355
Mupr11892g00004 290 PRINTS Ethylene responsive element binding protein signature 75 86 IPR001471 GO:0003700|GO:0006355
Mupr11892g00004 290 FunFam Ethylene-responsive transcription factor 2 73 132 - -
Mupr11892g00004 290 CDD AP2 75 132 IPR001471 GO:0003700|GO:0006355
Mupr11892g00004 290 MobiDBLite consensus disorder prediction 43 57 - -
Mupr11892g00004 290 Gene3D AP2/ERF domain 74 132 IPR036955 GO:0003700|GO:0006355
Mupr11892g00004 290 SMART rav1_2 74 137 IPR001471 GO:0003700|GO:0006355
Mupr11892g00004 290 SUPERFAMILY DNA-binding domain 74 132 IPR016177 GO:0003677
Mupr11892g00004 290 MobiDBLite consensus disorder prediction 43 72 - -
Mupr11892g00004 290 ProSiteProfiles AP2/ERF domain profile. 74 131 IPR001471 GO:0003700|GO:0006355
Mupr11892g00004 290 PANTHER DNA-BINDING DOMAIN 55 209 IPR044808 GO:0003700|GO:0009873
Mupr11892g00004 290 Pfam AP2 domain 75 123 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11892g00004 Mupr-Chr11892 11474 12434 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11892g00004 1 132 AP2-EREBP Transcription Factor Family AT3G16770 58.451 5.55e-44 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr11892g00004 AP2 8.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11892g00004 K09286 - gmx:100780763 483.796