Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11891g00002 ATGAAGAAACCGAAGCAAGCCCAGATGAACCCCAATTGGGTTCAACTCCAACAAAAGCTGAAGCTGAATGGCTCCAAGGCTTCAAGAACCTTCAAAAATTCAGATGACGACACCCCAGAATCAATATTGGGGAAACGTAAAGAGAGACCAGATGATGAATCCAATGATTGTGAGATTAATCCTCTTGTTCCTGTAAATGACGATTCAAGTCTGACAGATGCAGTGGCCATGGATTGTGAAATGGTTGGTGTTGGTCAAGGGAACAAAAGTGCCCTTGGAAGAGTGACGCTGGTCAATAAGTGGGGAAATGTTATTTATGATGAGTTTGTCCGGCCAATTGAGCGGGTTGTTGACTTCCGCACTAAAATTAGTGGCATAAGACCTCGAGATCTTAGAAAAGCAAAGGATTTTTGGATTGCTCAGAAGAAAGTGGCAGAGTTGATCGAAGGAAGAATCCTTGTTGGTCATGCCTTGAGCAATGATCTTAAGGCATTATTATTAAGTCATCCTAAAAAGGATATACGGGATACCTCCGAGTACCAACCATTTCTGAAGACAAGTAGCAGAAGAGCACTGCGACATCTTGCTGCCGAACATCTTGGTGCTAAGATCCAAACAGGAGAGCACTGCCCTGTTGAAGATGCCCGTGCTGCTATGCTGCTTTACCAAAGAAATAAGAAAGAATGGGAGAAGAGCATGAAAGATCAATTTCGGTTCAAACAGAAGCAAAGGAAATCAAAGCAGAAAAAGAAGCATAAGAAGAATGAAGATGCTTCAAATGGCAATCATGTTGAAATTGGTTCATAG 807 0.4226 MKKPKQAQMNPNWVQLQQKLKLNGSKASRTFKNSDDDTPESILGKRKERPDDESNDCEINPLVPVNDDSSLTDAVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTKISGIRPRDLRKAKDFWIAQKKVAELIEGRILVGHALSNDLKALLLSHPKKDIRDTSEYQPFLKTSSRRALRHLAAEHLGAKIQTGEHCPVEDARAAMLLYQRNKKEWEKSMKDQFRFKQKQRKSKQKKKHKKNEDASNGNHVEIGS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11891g00002 268 Gene3D - 70 252 IPR036397 GO:0003676
Mupr11891g00002 268 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 32 249 IPR047021 GO:0004527
Mupr11891g00002 268 SUPERFAMILY Ribonuclease H-like 74 231 IPR012337 -
Mupr11891g00002 268 Coils Coil 212 232 - -
Mupr11891g00002 268 MobiDBLite consensus disorder prediction 232 268 - -
Mupr11891g00002 268 FunFam Interferon-stimulated exonuclease gene 20 70 241 - -
Mupr11891g00002 268 Pfam Exonuclease 75 222 IPR013520 -
Mupr11891g00002 268 CDD REX4_like 75 223 IPR037431 GO:0006364|GO:0008408
Mupr11891g00002 268 MobiDBLite consensus disorder prediction 30 56 - -
Mupr11891g00002 268 MobiDBLite consensus disorder prediction 24 61 - -
Mupr11891g00002 268 SMART exoiiiendus 73 231 IPR013520 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11891g00002 74 228 C2H2 Transcription Factor Family AT5G40310 36.257 3.42e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11891g00002 K18327 - gmx:100819122 473.781