Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11878g00002 ATGTCGTTCCCTCACCACCGCCGATCTCAATCGGAGTTGCATTTCCGGATCTCCGACGACTTCAACCTGGAAGTGGATCTCTCTCCGCCACATTTCCAAGATCCCACCCCGCTCGACGAATCCGGATCCAAACCCCAATCTCCGCCTCCCGATACCGCCCGCCCCGGCCACCGCCGAAGCAATTCCGCCGACGCCTCTTCGTCCTCTTTGATGGACGGCATTGAGGCCAAGAAGGCCCTGTCCCCCGATAAGCTCGCCGAATTGTGGACCGTTGATCCCAAACGAGCCAAGAGGATTCTGGCTAACCGCCAATCCGCCGCTCGCTCCAAAGAGAGGAAAGCTTGCTATGTCTCCGAGCTTGAGAGAAAATTTCAATCTCTTCAAACGGAAGCAACCGCTCTTTCTGCTCAATTAAGTCTCTTCCAGAGAGATACAACTGGTCTGACTACTGAAAATACGGAGTTGAAGCTTAGGTTACAAGCCATGGAACAACAAGCTCAGTTATGTGATGCTCTAAATGAAGCACTGAAGAAAGAAGTTGATAGGCTCAGGATTGCAACTGGAGAGATAGTAATGCATGTGCATGCTGATACCTATGGTTTGGGAATGAATCAACTTGCATATTCTCAAGCTTCATTCTTCTCACATCAGTCACAACATGGGCAGAATGAACCTTGGGCCATACAAATGCCGCAGTTGCATTCCCTCTCATCATCTAATGTGTCTACTTCCCATGACCCTCTGTTTGACCTTGACATTCCCTATGATTTGTCAGAAATGTTGTCGAGTGATTCTATCGGCCAATTTCAGGGGCTGGATATAGGCCATGGGGTTCCTCATGTTCTGATGCAAGATTGTTCCTCCATTCCTGCGACCCTCCCCGCCTTCGCAGGCATTTTATGTGACACGTTGGCTGATAAGATTGCAGAAAGAGTTGCAAAGCGTTAA 948 0.4958 MSFPHHRRSQSELHFRISDDFNLEVDLSPPHFQDPTPLDESGSKPQSPPPDTARPGHRRSNSADASSSSLMDGIEAKKALSPDKLAELWTVDPKRAKRILANRQSAARSKERKACYVSELERKFQSLQTEATALSAQLSLFQRDTTGLTTENTELKLRLQAMEQQAQLCDALNEALKKEVDRLRIATGEIVMHVHADTYGLGMNQLAYSQASFFSHQSQHGQNEPWAIQMPQLHSLSSSNVSTSHDPLFDLDIPYDLSEMLSSDSIGQFQGLDIGHGVPHVLMQDCSSIPATLPAFAGILCDTLADKIAERVAKR 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11878g00002 315 Pfam bZIP transcription factor 94 146 IPR004827 GO:0003700|GO:0006355
Mupr11878g00002 315 Coils Coil 117 137 - -
Mupr11878g00002 315 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 4 229 - -
Mupr11878g00002 315 Gene3D - 93 145 - -
Mupr11878g00002 315 SMART brlzneu 90 154 IPR004827 GO:0003700|GO:0006355
Mupr11878g00002 315 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 92 155 IPR004827 GO:0003700|GO:0006355
Mupr11878g00002 315 FunFam probable transcription factor PosF21 93 146 - -
Mupr11878g00002 315 MobiDBLite consensus disorder prediction 25 70 - -
Mupr11878g00002 315 Coils Coil 159 179 - -
Mupr11878g00002 315 CDD bZIP_plant_RF2 95 144 IPR044759 GO:0003700|GO:0006355
Mupr11878g00002 315 SUPERFAMILY Leucine zipper domain 94 148 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11878g00002 Mupr-Chr11878 14467 18016 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11878g00002 4 274 bZIP Transcription Factor Family AT2G40620 46.296 1.23e-73 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mupr11878g00002 bZIP_1 3.3e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11878g00002 - - gmx:100807712 422.55