Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11872g00001 ATGGGATGCATTAATACCAAATACACTCCTCCTCGTAAAGTTGAGAGGTTGAAAAGAAACAAGGACCATGCAAACAATGCTTCTTCTTCTGCTTCTGCACCAAAACCAATCAGCTATTCATCTAACAAGCACGTGGAAGATGAGACTAAGAAGATAGAAAAACTAGTGTTGAGTGAGAAACAAAGAGATAGTGGTAATAAGGGTGGTGTTGCTACAAAAGATGACAAGAGTGAGGTTGATAATGTTTACGAGAAATCTCAAGAGAAGAAGAATATTGCACGCAATGAATTTGTGCAAGGGTGGCCCAAATGGCTCGTTGATAATATTCCACCAAAAGTTTTGGCTAGTTTGGCTCCCAAGAGTGCTGATTCCTATGAAAAACTCGGAAAGTTGGGACGTGGAACATATAGTAATGTATACAAAGCCCGAGATAAGGAGAGTGGAAAGGTTGTTGCTTTGAAGAAGGTAAGGTTTGACACATCGGATTCTGAAAGCATAAAGTTTATGGCAAGAGAGATCATGATTCTGCAGATGCTTGATCATCCCAATGTGATCAAACTGGAAGGACTAGCAACATCAAGGATGCAGTATAGTCTTTATCTTGTTTTTGATTACATGCAATCCGACCTTACAAGAATTATCTCTCGCTCTGGGGAGAAACTCACTCAACCACAGATCAAGTGTTACATGCAGCAGCTGCTTTGGGGGCTACAGCATTGTCATGAGAGGGGAGTTATGCACAGAGATATCAAACCTTCTAACTTGTTAGTAGATAAAAGAGGGGTGCTAAAAATAGCAGATTTTGGGCTGGCAAATTCTTTTGCTATTAAACCTGAAGGGCCTTTTACAAATCGAGTGGTGACACTTTGGTATAGAGCTCCTGAACTTCTTTTAGGATCAACTGATTATGGATATGAAATTGATCTCTGGAGTGCAGGGTGCTTGTTGGCTGAGATGTTTCTTGGAAGACCATTTATGCCTGGGAGGACTGAGGTTGAACAGCTTCACATGATCTTCAAACTTTGTGGTTCACCTTCAGCGGATTACTGGATAAAAATGAAGTTAATGACAAGCTTTCGTCCACCACAACATTATAAAGCTAATTATGCAGAAAACTTTAAGGATTTTCCTTCCTCTGCCTGTGCTCTCTTGACCACACTTCTTGATCTACACTCTCACTCTCGTGGCACCGCTGCCTCTGCTCTTGCAAATGAATTTTTCAAGTCAAGTCCATTGGCATGTGAGCTGTCAGAGTTACCAGTAATCTACAAAGAGGAGGATGAACCCTCACAAAGAAAGAGACGCAAAAGGCGCAAGGGTCTGAAAAATAAAGGGCAAATATTTGAAACAAGTGCATGCAATGTGAGCCAGTCACGAAAGAACCAAACTGCTGAACAAAGCAAGGGAGATTCAGAATCATTAAAGGAGGAGAAGAGTGTAGCACAAAACATGAAAGGTGAAGAAACAGGGAAAAGTGGAAGCAGCACATCATCACTCTTTATGCACGAAAATGCATATGTATCCCCAGCTTTTTTCTCTAGTGTGAGAAAATCCCCCAAAACTGAGGGCCATCCTAATGCTCTTAAGAACATAAAAAATTATACCCTCTTACAAGCCTCTATAATTGATATCATCAATCGCAATGAAGGCAATGAATTTGGTCCGTTGCGTAAGTCCATTTCTGCGTTGGACTTTCGAGTTGATCCAGAGAAGCTATCAACACTCTACGGACCAAAGAAGAAGTTGAGCCACGAAATG 1758 0.4113 MGCINTKYTPPRKVERLKRNKDHANNASSSASAPKPISYSSNKHVEDETKKIEKLVLSEKQRDSGNKGGVATKDDKSEVDNVYEKSQEKKNIARNEFVQGWPKWLVDNIPPKVLASLAPKSADSYEKLGKLGRGTYSNVYKARDKESGKVVALKKVRFDTSDSESIKFMAREIMILQMLDHPNVIKLEGLATSRMQYSLYLVFDYMQSDLTRIISRSGEKLTQPQIKCYMQQLLWGLQHCHERGVMHRDIKPSNLLVDKRGVLKIADFGLANSFAIKPEGPFTNRVVTLWYRAPELLLGSTDYGYEIDLWSAGCLLAEMFLGRPFMPGRTEVEQLHMIFKLCGSPSADYWIKMKLMTSFRPPQHYKANYAENFKDFPSSACALLTTLLDLHSHSRGTAASALANEFFKSSPLACELSELPVIYKEEDEPSQRKRRKRRKGLKNKGQIFETSACNVSQSRKNQTAEQSKGDSESLKEEKSVAQNMKGEETGKSGSSTSSLFMHENAYVSPAFFSSVRKSPKTEGHPNALKNIKNYTLLQASIIDIINRNEGNEFGPLRKSISALDFRVDPEKLSTLYGPKKKLSHEM 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11872g00001 586 PANTHER CELL DIVISION PROTEIN KINASE 123 412 - -
Mupr11872g00001 586 Pfam Protein kinase domain 125 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr11872g00001 586 ProSitePatterns Serine/Threonine protein kinases active-site signature. 245 257 IPR008271 GO:0004672|GO:0006468
Mupr11872g00001 586 SUPERFAMILY Protein kinase-like (PK-like) 120 412 IPR011009 -
Mupr11872g00001 586 MobiDBLite consensus disorder prediction 465 484 - -
Mupr11872g00001 586 CDD STKc_CDK9_like 125 407 - -
Mupr11872g00001 586 MobiDBLite consensus disorder prediction 1 81 - -
Mupr11872g00001 586 FunFam Putative serine/threonine-protein kinase 208 445 - -
Mupr11872g00001 586 MobiDBLite consensus disorder prediction 452 497 - -
Mupr11872g00001 586 ProSitePatterns Protein kinases ATP-binding region signature. 131 154 IPR017441 GO:0005524
Mupr11872g00001 586 ProSiteProfiles Protein kinase domain profile. 125 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr11872g00001 586 Gene3D Transferase(Phosphotransferase) domain 1 208 447 - -
Mupr11872g00001 586 MobiDBLite consensus disorder prediction 24 39 - -
Mupr11872g00001 586 FunFam probable serine/threonine-protein kinase At1g54610 112 207 - -
Mupr11872g00001 586 SMART serkin_6 125 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr11872g00001 586 MobiDBLite consensus disorder prediction 41 81 - -
Mupr11872g00001 586 Gene3D Phosphorylase Kinase; domain 1 114 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11872g00001 Mupr-Chr11872 7700 12359 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11872g00001 110 439 Core Cell Cycle Gene Families AT5G10270 43.966 2.91e-92 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mupr11872g00001 Pkinase 1.9e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11872g00001 K08819 - gmx:102667260 865.914