Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1186g00002 ATGACGCGCACGCTAAGAATTCTCAAATCCGCGGACAACGCCACCGCCGTTGCGGCAGCGCCGCCGCCGGAGGCGGTGGCCCTGGAGTCCGATTTCGTGGTGATTCTGGCTGCTCTGCTATGCGCCCTAATCTGCGTCGTGGGACTCGTGGCCGTGGCGCGGTGTGCGTGGCTCCGGCGAGGCGCCGGCGGCGGAAACTCTCCCCGGCAGGCCCTGGCGAACAAGGGCCTCAAGAAGAAGGTGCTGCAGTCGCTACCGAAGTTCAACTACGTGGACAGCAACCCGAGCAAGTGGGTGGCGACGTCGGAATGCGCGATCTGCCTGGCGGAGTTCGCCGCCGGCGACGAGATCCGCGTGCTGCCGCAGTGCGGCCACGGCTTCCACGTATACTGCATCGACACGTGGCTCGGGTCCCACTCCTCGTGCCCTTCCTGTCGGCAGGTTCTGGCGGTGGCCAGGTGTCAGAAGTGCGGCCGCTTTCCGGCCACCGCCACCGGAGCCTCCAGAACGGCGGTTACAGAACCCGAATTGAAGTCCAGAGAAGACGACAATGCTGCTTCTAATAGTAATAGTAATAATAGTTGCAACAGTAGCATCGGTTTTAGTGGTGGCGGCATTGACGCAGAACACCATCACAGCCACCATGTGAACCGTGGGTTCTTGCCCTGA 669 0.6233 MTRTLRILKSADNATAVAAAPPPEAVALESDFVVILAALLCALICVVGLVAVARCAWLRRGAGGGNSPRQALANKGLKKKVLQSLPKFNYVDSNPSKWVATSECAICLAEFAAGDEIRVLPQCGHGFHVYCIDTWLGSHSSCPSCRQVLAVARCQKCGRFPATATGASRTAVTEPELKSREDDNAASNSNSNNSCNSSIGFSGGGIDAEHHHSHHVNRGFLP 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1186g00002 222 SMART ring_2 104 145 IPR001841 -
Mupr1186g00002 222 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 151 IPR013083 -
Mupr1186g00002 222 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 20 158 - -
Mupr1186g00002 222 CDD RING-H2_EL5-like 103 146 - -
Mupr1186g00002 222 FunFam E3 ubiquitin-protein ligase ATL6 66 152 - -
Mupr1186g00002 222 SUPERFAMILY RING/U-box 92 151 - -
Mupr1186g00002 222 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
Mupr1186g00002 222 Pfam Ring finger domain 103 146 IPR001841 -
Mupr1186g00002 222 MobiDBLite consensus disorder prediction 168 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1186g00002 Mupr-Chr1186 15057 15725 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1186g00002 1 182 C3H Transcription Factor Family AT1G76410 57.068 5.40e-64 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1186g00002 - - gmx:100787383 333.569