Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11869g00001 ATGAAGGACTTTTGGAGCATGATTTGTGGGGATTATGTTTGTTCTGAGACTGTAGGAAAGCCTTTCTGTTATGATTTCAAGTTTTTGAAAGATCCTTCTGCATGCATCATCCATTTGATGATCATTTGCTTTGATGTGTTTCTGTTGATTATGATGTCATTTGTTATGATTCGGAAGTCTTCTTTGAGACCGTTTCGGGTGGAAAGATATTCAAATTTGCAGCTAGTTTCAGCCATATTCAATGGCTCTGTTGGGTTGTTGCATTTGTGCTTAGGCATTTGGGTTTTAGAGGAAAAGTTAAGGAAAACCCACATTGGTTTTCCACTTAGTTGGTGGTTGCCAGAACTCTTTCATGGATTCACATGGTTGTTAGTAGGTTTAAGTGTAAGTCTTCAGCTGAACCAACTTCCAATGGCATGGTTGTGGCTATTTAGTATTCTTATATTCTTTGTTTCTGGTTTTTATTGTGCTTTATCCATGTTTTACATAATTAGTACCAGAGAACTGTCCCTCAAGGCAGCTTTGGATGTTCTATCTTTTCCTGGGGCAATTTTCCTACTCTTATGCACATATAAAATAAGTAAATATGAACACAGTGATAGAGAAAATGATGAAAGTCTTTATGCCCCTTTAAGTGGCCAGTTAAATGAAGTTGATCCTATTAGCTATGTAACTCCATTTGCCAAAGCTGGATTCTTTAGTAAGATATCATTTTGGTGGTTGAGTCCATTGATGAAAAAGGGTCAAAAGAAAACACTTCAAGATGAAGATATCCCAAAGTTGCCAGAGTCAGATCGTGCAGAAAGCTGCTATTCGTCATTTGTGGATCAATTGAGCAGGCAGGAAACAAAGGAACCATTGTCACAACAATCATATTTGTGGGCAATAATTTTGTGCCATCGGAGAGAGATTTTGGTGTCAGGACTTTTTGCATTGCTCAAGGTACTCACTCTGTCTGCTAGTCCTCTACTACTGAATGCCTTTATATTGGTCTCTGAGGGTAATGGAAGTTTTAAATATGAAGGTTATGCATTGGCCATCTCATTTTTATTTACAAAGATCATAGAATCCATATCACAAAGGCAGTGGTATTTCCGTAGCAGACTTGTTGGTATGAAAGTTAGGTCGCAACTCACTGCAGCCATTTATAAAAAACAACTGAGATTATCCAATGCTGCTAGATTGATTCACTCTGGGGGTGAGATAATAAATTATGTGACTGTAGATGCTTATAGGATTGGAGAATTTCCATTTTGGTTTCACCAAACGTGGACAATAATTATCCAACTATGTATTGTATTAGTAATTCTTTCTCATGCTGTTGGGCTAGCAACGATTGCCTCGTTGGTGGTGATAGTTCTCACAGTGCTTTGCAATACTCCTCTAGCAAAGTTACAGCATAAGTTTATGACCAAACTTTTGGTGGCAGAGGATGAGAGATTGAAGGCCAGTTCTGAGGCTCTAGTGAATATGAAAGTGTTGAAGTTATATGCATGGGAAATCCATTTTAAAAATGCCATAGAAAGCTTAAGAAATGTGGAACTCAAATGGTTATCCTCAGTGCTATTTCAAAAAGCATACAACATCATTCTCTTTTGGTGTTCGCCTATTTTGGTCTATGTTGCTTCCTTCGCAGCATGTTACTTCTTGAAAATTCCTTTACATGCAAATAACCTTTTCACTTTTGTGGCAACTTTACGCCTCTTGCAAGATCCGATTTCTATCATCCCGGATGTAATTGGAGTGGTCATTCAAACAAAAATTGCATTTGCACGCATTGTAAGGTTCCTTGATGCACCGGAGCTGCAGAGTGCAAATGTCCAGAAAAGGTGCTTTAATGAGAATCTCAAGGGTTCAATTTTAATCAAATCTGCAGACTTTTCATGGGAATGTAATGTATCAAAGCCAACACTGAGAAACATAGATTTAGAGGTTAGACCTGGGCAAAAGATTGCTATATGTGGAGAGGTTGGCTCAGGCAAATCAACACTCTTGGCAGCAATTCTTGGAGAAGTTCCTAATACTAAAGGAAATATTGCAGTTAATGGGAAGTTTGCTTATGTTTCCCAAACAGCATGGATACCAACAGGAACAATACAGGAAAATATTTTGTTTGGATCAACTTTGGATGTCCAGAGGTATCAAGAGACACTTCATAGGTCTTCATTGGTGAAGGACCTTGAGTTGTTTCCCCATGGTGAGTTCACTGAAATAGGAGAGAGAGGAGTTAACCTGAGTGGGGGTCAAAAGCAGCGAGTTCAGCTTGCTCGTGCCCTTTATCAGAATGCCGATGTATATCTCTTGGATGATCCATTCAGTGCTGTTGATGCACATACTGCCACAAATTTGTTTAATGAATACATATTGGAAGGTCTTGCAGGGAAGACAGTCTTACTGGTGACTCATCAAGTTGACTTTCTCCCAGCATTTGACTCCATTTTGTTGATGTCAGATGGGAAAATCCTACAAGCTGCCCATTATCATCAATTACTGACCTCAAGCAATGATTTTCGGGACCTTGTCAATGCTCACAAAGAGACTGCTGGTTCTGATCAGCTTGCAGATGTTACTTCTGCACAGAGACATTCAAATTCTGACAGAGAGATTAGTCAATGTTTCATAGAGCAATTTAAACCATTAAATGGTGATCAATTAATTAAGCAAGAAGAGAGGGAAAGAGGGGACATAGGGCTGAAGCCTTATTTTCAGTATCTGAGTCAGAACAGAAGTTATATATACTTCTCTGTGGCTTCTCTTTCATTTCTTATGTTTGTCATTTGCCAGATATTGCAAAACTCATGGATGGCTGCTAATGTTGACAATCCTCAAGTCAGCACATTGCAATTGATTGTTGTTTACATGCTGATTGGAGCTGGTTCTATAGTTTTCATGTTGATCAGAAGTCTTCTTGCAGTTGCTTTTGGTCTTCAATCATCAAAATATTTGTTCTCTCAGTTGGTGAACTCCCTTTTCCGTGCACCAATGTCTTTTTATGACTCCACACCTTTGGGAAGGATACTTAGCAGGGTCTCATTGGATTTGAGCATTGTGGATCTTGATATCCCATTTGTCCTCACTTATACTGTGGGATCTACTATAAGCTGCTATGCTGATCTTACAGTTTTAGGAGTCGTCACCTGGCAAGTATTGTTTGTTGCTATACCAATGGTTTATTTTGTTATCCGCTTCCAGAGACAATACTTTGCTGCTGCAAAAGAATATATGCGGATGAATGGCACAACAAAATCCTTTATAGCTAATCATGTAGCTGAAACTGTTGCTGGAGCAATGACAATAAGGGCTTTTAAAGAGGAAGATCGTTTTTTTCTGAAGAGTCTCGATCTAATTGATACCAATTCTAGTCCTTACTTCCATACTTTTGCTTCAAATGAATGGTTGATCCTTCGATTAGAAACAGCCTGTGCAGTTGTTCTTGCCTCTGTGGCGCTTTGCATGGTGGTGCTTCCACCAGGGACTTTAACCTCTGGATTTATTGGCATGGCCCTTTCTTATGGCCTTTCACTAAACAGTTCCTTAGTATATTCAATTCAAAGTCAATGCATTCTAGCAAATCAAATAATATCTGTAGAGAGGCTAAATCAGTATATGCATATACCAAGTGAGGAACGAGAAGTGATAGAAGGAAATCGTCCTCCGGCTAATTGGCCAGTTTCAGGCAAAGTAGAAATACAAAATTTGCAGATAAGATATAGGCCTGAAGGGCCACTTGTACTCCATGGTATTACTTGCACTTTTGAAGGAGGGCACAAGATTGGTATTGTTGGCAGGACAGGCAGTGGGAAGTCCACTCTTATAGGTGCTTTATTTCGTCTTATGGAACCGGCAAGTGGAAAAATTGTAGTTGATGGCATAGACATCTCTTCTATTGGCCTTCATGATTTGAGGTCACGTTTTTGCATTATACCTCAGGATCCTACCCTTTTCAATGGGACAGTTAGATATAATTTGGACCCTTTATCTCAACATTCTGATCAAGATATATGGGAGGTTCTTGGTAAGTGTCAATTGCAAGAGGCAGTCCAGGATAAAGGTGGATTAGACTCCTCAGCAACAAAATGTTACTCAGTTGTTGAAGATGGATCAAACTGGAGCATTGGACAAAGGCAGTTATTCTGTTTGGGGCGTGCTCTTTTGAGGAGAAGTAAGATATTGGTTCTGGATGAAGCTACTGCATCAATTGATAATGCAACTGATTTGATTCTGCAGAAAACCATTAGGACTGAGTTTGGAAATTGTACAGTAATCACTGTAGCCCACAGGATACCAACTGTGATGGATTGCACCATGGTTCTTGCCATTAGTGATGGAAAACTAGCGGAGTATGATGAGCCAATGAACTTGATGAAGAATGAAAAATCATTGTTTGGGCAACTTGTCAAGGAATATTGGTCTCATTTTCAGTTTGCAGAATCACAT 4437 0.3924 MKDFWSMICGDYVCSETVGKPFCYDFKFLKDPSACIIHLMIICFDVFLLIMMSFVMIRKSSLRPFRVERYSNLQLVSAIFNGSVGLLHLCLGIWVLEEKLRKTHIGFPLSWWLPELFHGFTWLLVGLSVSLQLNQLPMAWLWLFSILIFFVSGFYCALSMFYIISTRELSLKAALDVLSFPGAIFLLLCTYKISKYEHSDRENDESLYAPLSGQLNEVDPISYVTPFAKAGFFSKISFWWLSPLMKKGQKKTLQDEDIPKLPESDRAESCYSSFVDQLSRQETKEPLSQQSYLWAIILCHRREILVSGLFALLKVLTLSASPLLLNAFILVSEGNGSFKYEGYALAISFLFTKIIESISQRQWYFRSRLVGMKVRSQLTAAIYKKQLRLSNAARLIHSGGEIINYVTVDAYRIGEFPFWFHQTWTIIIQLCIVLVILSHAVGLATIASLVVIVLTVLCNTPLAKLQHKFMTKLLVAEDERLKASSEALVNMKVLKLYAWEIHFKNAIESLRNVELKWLSSVLFQKAYNIILFWCSPILVYVASFAACYFLKIPLHANNLFTFVATLRLLQDPISIIPDVIGVVIQTKIAFARIVRFLDAPELQSANVQKRCFNENLKGSILIKSADFSWECNVSKPTLRNIDLEVRPGQKIAICGEVGSGKSTLLAAILGEVPNTKGNIAVNGKFAYVSQTAWIPTGTIQENILFGSTLDVQRYQETLHRSSLVKDLELFPHGEFTEIGERGVNLSGGQKQRVQLARALYQNADVYLLDDPFSAVDAHTATNLFNEYILEGLAGKTVLLVTHQVDFLPAFDSILLMSDGKILQAAHYHQLLTSSNDFRDLVNAHKETAGSDQLADVTSAQRHSNSDREISQCFIEQFKPLNGDQLIKQEERERGDIGLKPYFQYLSQNRSYIYFSVASLSFLMFVICQILQNSWMAANVDNPQVSTLQLIVVYMLIGAGSIVFMLIRSLLAVAFGLQSSKYLFSQLVNSLFRAPMSFYDSTPLGRILSRVSLDLSIVDLDIPFVLTYTVGSTISCYADLTVLGVVTWQVLFVAIPMVYFVIRFQRQYFAAAKEYMRMNGTTKSFIANHVAETVAGAMTIRAFKEEDRFFLKSLDLIDTNSSPYFHTFASNEWLILRLETACAVVLASVALCMVVLPPGTLTSGFIGMALSYGLSLNSSLVYSIQSQCILANQIISVERLNQYMHIPSEEREVIEGNRPPANWPVSGKVEIQNLQIRYRPEGPLVLHGITCTFEGGHKIGIVGRTGSGKSTLIGALFRLMEPASGKIVVDGIDISSIGLHDLRSRFCIIPQDPTLFNGTVRYNLDPLSQHSDQDIWEVLGKCQLQEAVQDKGGLDSSATKCYSVVEDGSNWSIGQRQLFCLGRALLRRSKILVLDEATASIDNATDLILQKTIRTEFGNCTVITVAHRIPTVMDCTMVLAISDGKLAEYDEPMNLMKNEKSLFGQLVKEYWSHFQFAESH 1479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11869g00001 1479 SUPERFAMILY ABC transporter transmembrane region 902 1208 IPR036640 GO:0005524|GO:0016020
Mupr11869g00001 1479 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1228 1467 IPR003439 GO:0005524
Mupr11869g00001 1479 FunFam ABC transporter C family member 10 603 856 - -
Mupr11869g00001 1479 Gene3D - 595 867 IPR027417 -
Mupr11869g00001 1479 Pfam ABC transporter 638 772 IPR003439 GO:0005524
Mupr11869g00001 1479 SUPERFAMILY ABC transporter transmembrane region 293 600 IPR036640 GO:0005524|GO:0016020
Mupr11869g00001 1479 FunFam ABC transporter C family member 3 1211 1468 - -
Mupr11869g00001 1479 Pfam ABC transporter transmembrane region 926 1169 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr11869g00001 1479 Pfam ABC transporter transmembrane region 305 571 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr11869g00001 1479 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 227 1467 - -
Mupr11869g00001 1479 ProSitePatterns ABC transporters family signature. 745 759 IPR017871 GO:0005524|GO:0016887
Mupr11869g00001 1479 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 613 843 IPR027417 -
Mupr11869g00001 1479 Gene3D ABC transporter type 1, transmembrane domain 877 1210 IPR036640 GO:0005524|GO:0016020
Mupr11869g00001 1479 CDD ABC_6TM_ABCC_D2 912 1203 IPR044726 GO:0140359
Mupr11869g00001 1479 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 305 585 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr11869g00001 1479 SMART AAA_5 647 820 IPR003593 GO:0016887
Mupr11869g00001 1479 SMART AAA_5 1254 1451 IPR003593 GO:0016887
Mupr11869g00001 1479 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 622 843 IPR003439 GO:0005524
Mupr11869g00001 1479 Gene3D ABC transporter type 1, transmembrane domain 292 594 IPR036640 GO:0005524|GO:0016020
Mupr11869g00001 1479 CDD ABCC_MRP_domain2 1226 1451 - -
Mupr11869g00001 1479 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 916 1191 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr11869g00001 1479 CDD ABCC_MRP_domain1 620 820 - -
Mupr11869g00001 1479 FunFam ABC transporter C family member 10 288 601 - -
Mupr11869g00001 1479 Gene3D - 1212 1468 IPR027417 -
Mupr11869g00001 1479 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1218 1464 IPR027417 -
Mupr11869g00001 1479 Pfam ABC transporter 1245 1398 IPR003439 GO:0005524
Mupr11869g00001 1479 CDD ABC_6TM_ABCC_D1 306 593 IPR044746 GO:0140359
Mupr11869g00001 1479 FunFam ABC transporter C family member 5 877 1209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11869g00001 Mupr-Chr11869 1893 8991 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11869g00001 571 836 Calmodulin-binding Proteins AT2G36910 27.915 7.44e-26 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11869g00001 K05666 - gmx:100811468 2258.8