Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11863g00001 ATGGAGATAAGTGGTACTTGTATAGCTGCTTACAAGACTATCCCATCTTTCCTACTCATGAAGAGACTTGGCAGCTCAGATTCTTCCACTCCTCTAATAAAAATTTCTCCACCAACAGAGGAACACAGTCCGAGGAAGAGGCAGCACATGTATGGTAGGGAGTTTGAATCGATGCTGGAAGAAGTGGACGAGGAAGGGTGTGTAGAAGAAGCGGGGCATCCTTCTGAGAAAAAGCGTCGACTAAGTGTAGATCAAGTTAAGGCTTTGGAAAAAAACTTTGAGGTTGAAAACAAGCTTGAACCTGAGAGGAAGCTCAAGCTTGCCCAAGAACTTGGCTTGCAACCTAGACAAGTTGCAGTTTGGTTCCAAAACCGTCGAGCTCGATGGAAAACCAAACAATTGGAGAGAGATTATGGCCTTCTCAAAGCCAATTTTGATGCTCTTAAGGTTAACTATGACACCCTCAATCAGGACAACGAAGCGCTACGAAACCAGATTAAAGAATTGAAATCGAGGCTGGAAGAAGAGAAGACGGTTTCGGTGGTGCCCGAGTCGGAAGAGAAAACGAGCGAGCCATGTTCTGAGTCGGAGGATCAGTTGAATTACGAGTGTTTGAACAAGAGCGATTGTGTGGGAGGCGCGTGGGTCTTCAAAGACGGTTCTTCTGACAGCGACTCAAGCGCAATGGAGAACAACAGGGACAGCCCCAAAGGGGTGATGAAATCTTCATGTGGGGTTATCGAAACGGAGTCTTGGATGAACTGTTTGCAGTTACAGAAAGCAGCGTATCAGTGGCAGAACGTGAAGATGGAGGAGCACAATTTGCTGAGTGCGGACGAAGCCTGCAATTTCTTCTCGGATGAACAACCACCCACCCTACAGTGGTACTGTCCAGACCAGTGGAGTTGTGCTCAATTCATATAA 924 0.4675 MEISGTCIAAYKTIPSFLLMKRLGSSDSSTPLIKISPPTEEHSPRKRQHMYGREFESMLEEVDEEGCVEEAGHPSEKKRRLSVDQVKALEKNFEVENKLEPERKLKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGLLKANFDALKVNYDTLNQDNEALRNQIKELKSRLEEEKTVSVVPESEEKTSEPCSESEDQLNYECLNKSDCVGGAWVFKDGSSDSDSSAMENNRDSPKGVMKSSCGVIETESWMNCLQLQKAAYQWQNVKMEEHNLLSADEACNFFSDEQPPTLQWYCPDQWSCAQFI 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11863g00001 307 ProSitePatterns 'Homeobox' domain signature. 107 130 IPR017970 GO:0000981|GO:0006355
Mupr11863g00001 307 SMART HOX_1 75 136 IPR001356 GO:0003677
Mupr11863g00001 307 PRINTS Lambda-repressor HTH signature 103 112 IPR000047 GO:0003677
Mupr11863g00001 307 PRINTS Lambda-repressor HTH signature 112 128 IPR000047 GO:0003677
Mupr11863g00001 307 FunFam Homeobox-leucine zipper protein HAT5 70 134 - -
Mupr11863g00001 307 Pfam Homeobox associated leucine zipper 132 173 IPR003106 GO:0006355|GO:0043565
Mupr11863g00001 307 ProSiteProfiles 'Homeobox' domain profile. 72 132 IPR001356 GO:0003677
Mupr11863g00001 307 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 60 295 IPR045224 GO:0003700
Mupr11863g00001 307 SUPERFAMILY Homeodomain-like 63 134 IPR009057 -
Mupr11863g00001 307 Coils Coil 145 179 - -
Mupr11863g00001 307 CDD homeodomain 77 133 IPR001356 GO:0003677
Mupr11863g00001 307 Pfam Homeodomain 77 130 IPR001356 GO:0003677
Mupr11863g00001 307 MobiDBLite consensus disorder prediction 28 47 - -
Mupr11863g00001 307 Gene3D - 72 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11863g00001 Mupr-Chr11863 16328 17597 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11863g00001 20 302 Homeobox Transcription Factor Family AT4G40060 46.926 6.39e-73 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mupr11863g00001 Homeodomain 3.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11863g00001 K09338 - gmx:100777924 381.333