Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11860g00001 ATGGATCGGGAAGGAGGATCCAACGGCGGATCTTGCTACTACTCCGTTCTCGGGATTCGTAGGGATGCTTCCTTCTCTGATATTCGCACTGCCTACCGCAAACTCGCCATGAGATGGCACCCGGACAAGTGGGCTCAGAATCCTGCCACCGCCGGAGAAGCCAAGTGGCGCTTTCAGCAAATCCAAGAAGCTTACTCAGTTCTTTCCGATCAGTCTAAAAAGTCAATGTACGATGCCGGGCTCTACGACCCTTTCGAGGAAGAAGACCAAGAATTCTGTGATTTCATGCACGAAATGATTTCGATGATGAACAATGTGAAAGACGAGGGGGACAGTTTGGAAGACCTACAGAGGATGTTCGTGGAGATGGTTGGGGGTGATGGGATCGGCTTTGACTTGAACCAGGATCAGACGGCTGGGAAGCAAGGACGCGTCAATGGATCAAGGGGCAATGCTGCCAAGCGCACCAACTCTCGATCTTAG 483 0.5176 MDREGGSNGGSCYYSVLGIRRDASFSDIRTAYRKLAMRWHPDKWAQNPATAGEAKWRFQQIQEAYSVLSDQSKKSMYDAGLYDPFEEEDQEFCDFMHEMISMMNNVKDEGDSLEDLQRMFVEMVGGDGIGFDLNQDQTAGKQGRVNGSRGNAAKRTNSRS 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11860g00001 160 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Mupr11860g00001 160 SMART dnaj_3 11 73 IPR001623 -
Mupr11860g00001 160 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Mupr11860g00001 160 Pfam DnaJ domain 13 78 IPR001623 -
Mupr11860g00001 160 PRINTS DnaJ domain signature 14 32 IPR001623 -
Mupr11860g00001 160 PRINTS DnaJ domain signature 32 47 IPR001623 -
Mupr11860g00001 160 PRINTS DnaJ domain signature 53 73 IPR001623 -
Mupr11860g00001 160 Gene3D DnaJ domain 2 102 IPR036869 -
Mupr11860g00001 160 SUPERFAMILY Chaperone J-domain 12 86 IPR036869 -
Mupr11860g00001 160 MobiDBLite consensus disorder prediction 135 160 - -
Mupr11860g00001 160 MobiDBLite consensus disorder prediction 132 160 - -
Mupr11860g00001 160 PANTHER PUTATIVE, EXPRESSED-RELATED 7 131 - -
Mupr11860g00001 160 CDD DnaJ 12 70 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11860g00001 Mupr-Chr11860 3059 4232 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11860g00001 12 79 C2H2 Transcription Factor Family AT1G74250 42.029 1.93e-13 65.1