Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11859g00002 ATGGACAATATCTACACTTTGGCTTTTATACTTATTCTATGTTTGAAGGTTAGTAGTGTTTCTTCTAGAGATAGACAATGGGGTGGTGAGAGGAGAATGAGCTCTGGGGATAATGGTGATCGTGTGACTAACTTGCCTGGCCAGCCTCCTGTAGATTTCCAGCACTACGCTGGATATGTCACAGTCAACCAAACCAGTGGACGAGCACTCTTTTACTGGTTCTATGAGGCCATCACCAAGCCTCAAGACAAACCATTGGTTCTGTGGCTTAATGGAGGTCCTGGGTGCTCCTCTGTGGGATATGGAGCAACACAGGAGATTGGCCCATTTTTAGTGGACACCGATGGCAAGGGCCTTAAATTTAATAACTTCTCATGGAACAAAGAGGCCAACATGTTATTCTTGGAATCTCCTGTTGGGGTTGGCTTTTCCTATTCAAATACAACCACCGAATATGCACAACTGGGAGATGACTTCACAGCTAATGATGCTTACACTTTTCTGCACAATTGGTTCCTCAAGTTTCCATCATATAGAACAAGGACATTCTACATAGCGGGAGAGAGCTATGCAGGAAAGTATGTACCCGAGCTGGCTGAACTCATCCACGATAGAAACAAGGATCCTTCCCTTCATATTGATCTCAAGGGAATTTTGCTGGGAAACCCTGAAACATCTGATGCTGAGGACTGGTCAGGTATGGTTGATTATGCTTGGAGCCATGCAGTGATATCTGATGAGACTTACAAAACAATCAAAGCAAGTTGTGACTTTAATAGCAGTGATCCGTGGAGTAATAAAGATTGTAGCAGAGGAGTGGATGAAATACTCAAACAGTACAACGAAATTGATATCTACAGCCTCTACACCTCTGTTTGCTTCGCCAGTACAGCGCGTTCCAACGATCAATCCATGCATATGGTGATGTTTCGCTCATCTAAAATGGTTAATCTGTTAAGGATGTTTTATCAATTTATCATTTTACTCACCCACACATTTTGTGAAATTGAGAAGCTTGTAACAATTATTAAAACCAATATTGATGGCATTTCATTACTAGTTGTGAACAGTGTATATAAGGTATATCCTGTACTGACACTGGTGGATTTGGTACAGATGCCACGGATCATGGGAGGTTATGATCCATGTTTGGATGACTATGCTAAGGCTTTTTATAATAGACCAGATGTTCAGAAGGCACTCCATGCTAGTGATGGTCACAATCTTAGGAATTGGAGTATTTGCAATGAAAAAATATTCAAGAGCTGGGCACAATCAAAGCCTTCTGTTATCCCAATCTACAGGAAGCTTATTTCAGCAGGACTTAGGATTTGGGTTTACAGTGGAGACACTGATGGTAGGGTGCCGGTGCTGTCAACGAGATACAGCTTAAGTATTCTAGGTTTGCCTATCACTAAGAGATGGAGGCCTTGGTACCATGAAAAGGAGGTTAGTGGGTGGTATCAAGAATATGAAGGGCTTACGTTTGCGACATTTCGTGGAGCTGGCCATGCAGTGCCTTGTTTCAAACCAAGCAACTCACTGGCATTCTTCTCCTCCTTTCTTCTTGGAGAATCACCACCTTCTATAAAATGA 1596 0.4236 MDNIYTLAFILILCLKVSSVSSRDRQWGGERRMSSGDNGDRVTNLPGQPPVDFQHYAGYVTVNQTSGRALFYWFYEAITKPQDKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGKGLKFNNFSWNKEANMLFLESPVGVGFSYSNTTTEYAQLGDDFTANDAYTFLHNWFLKFPSYRTRTFYIAGESYAGKYVPELAELIHDRNKDPSLHIDLKGILLGNPETSDAEDWSGMVDYAWSHAVISDETYKTIKASCDFNSSDPWSNKDCSRGVDEILKQYNEIDIYSLYTSVCFASTARSNDQSMHMVMFRSSKMVNLLRMFYQFIILLTHTFCEIEKLVTIIKTNIDGISLLVVNSVYKVYPVLTLVDLVQMPRIMGGYDPCLDDYAKAFYNRPDVQKALHASDGHNLRNWSICNEKIFKSWAQSKPSVIPIYRKLISAGLRIWVYSGDTDGRVPVLSTRYSLSILGLPITKRWRPWYHEKEVSGWYQEYEGLTFATFRGAGHAVPCFKPSNSLAFFSSFLLGESPPSIK 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11859g00002 531 SUPERFAMILY alpha/beta-Hydrolases 38 525 IPR029058 -
Mupr11859g00002 531 Pfam Serine carboxypeptidase 46 522 IPR001563 GO:0004185|GO:0006508
Mupr11859g00002 531 PRINTS Carboxypeptidase C serine protease (S10) family signature 135 145 IPR001563 GO:0004185|GO:0006508
Mupr11859g00002 531 PRINTS Carboxypeptidase C serine protease (S10) family signature 494 507 IPR001563 GO:0004185|GO:0006508
Mupr11859g00002 531 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 134 IPR001563 GO:0004185|GO:0006508
Mupr11859g00002 531 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 196 IPR001563 GO:0004185|GO:0006508
Mupr11859g00002 531 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 41 511 IPR001563 GO:0004185|GO:0006508
Mupr11859g00002 531 FunFam Carboxypeptidase 36 295 - -
Mupr11859g00002 531 Gene3D - 430 524 - -
Mupr11859g00002 531 Gene3D alpha/beta hydrolase 37 295 IPR029058 -
Mupr11859g00002 531 FunFam Carboxypeptidase 430 524 - -
Mupr11859g00002 531 Gene3D - 383 419 - -
Mupr11859g00002 531 ProSitePatterns Serine carboxypeptidases, serine active site. 185 192 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11859g00002 Mupr-Chr11859 17491 21981 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11859g00002 388 525 Calmodulin-binding Proteins AT2G22960 32.374 4.05e-14 69.3