Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11846g00001 ATGCCTCTCTTGCATCTCAATTCTCAACACCCTTGTGTTGTGTCTCTCTCCTCCACCATTGAGCATTCCCCTGTACCTCCTTCCTTTCTCCTTCTACCTATATCCCCTGACTCAACTATAAACAGCAGCACAATTAGTAAGGTTTCAGAGATTTCGGTGCCTCAGACTCCCCAGAGTGAGGGTGAGATCTTGCCCTACTCATCCAATCTGAAGAGCTTTAGTTTGACAGAACTTACAGCTGCCACAAGAAATTTCCGTACAGACAGTGCGTTAGGAGAAGGTGCTTTTGGATCAGTTTTTAAGGGCTGGATTGATGATCACTCACTGTCTGCTGCAAAACCTGGTACGGGCATTGTTGTTGCTGTGAAAAGACTTGATCAGGATAGCTTCCAAGGTCACAAGGAGTGGTTGGCAAGGCATGGTATGACTCATGAAGCAAGTCTCGAGGCTGAAGTAAACTATCTAGGCCAGCTTTCTCATCCTCATCTAGTGAAATTAATTGGATATTGCTTTGAAGATAAAAACCGCCTTCTGGTCTATGAATTTATGCCTCGTGGTAGCTTGGAGAATCACTTGTTCATGAGAGGCTCATATTTTCAACCTCTTTCATGGGGCCTCCGTTTGAAAGTCGCTCTTGGCGCTGCCAAAGGGCTTGCATTTCTTCACAGTGCAGAAACAAAAGTGATATATCGAGATTTCAAGACTTCAAATGTCTTGCTGGATTCGAATTATAATGCAAAGCTCGCTGATTTGGGTCTGGCAAAGGACGGACCAACACGTGACAAAACTCATGTCTCCACCAGAGTAATGGGAACCTATGGATATGCAGCTCCTGAATATCTAGCAACAGGTCAACTGAGTGCTAAGAGTGATGTATTCAGTTTTGGGGTAGTCCTGCTGGAAATGTTATCAGGAAGGAGGGCTGTGGACAAGAATAGACCATCAGGGCAGCACAATTTGGTGGAATGGGCAAAGTCATACTTAGCCAACAAGCGTAAGCTTGTGCGTGTATTGGATAACCGTCTTGAAGGCCAATATGCATTAGATGAGGCCTATAAGGTAGCTACCCTCTCTCTTCGATGCCTTGCAACGGAATCCAATTTGAGACCAAACATGGACGAGGTTGTCAAAGATTTGGAGCAGCTGCAGGTTCCCCATGTAAATCAAAACCGTTCTGTGAATGCTTCTCGTGGTCGTAGAAAAAGTGCTGATGATTTTACACATGGTAGAATCGCCACAGCTTCAGTTTCCCCGCTCTTAAATGACATTGCAAATACA 1278 0.4491 MPLLHLNSQHPCVVSLSSTIEHSPVPPSFLLLPISPDSTINSSTISKVSEISVPQTPQSEGEILPYSSNLKSFSLTELTAATRNFRTDSALGEGAFGSVFKGWIDDHSLSAAKPGTGIVVAVKRLDQDSFQGHKEWLARHGMTHEASLEAEVNYLGQLSHPHLVKLIGYCFEDKNRLLVYEFMPRGSLENHLFMRGSYFQPLSWGLRLKVALGAAKGLAFLHSAETKVIYRDFKTSNVLLDSNYNAKLADLGLAKDGPTRDKTHVSTRVMGTYGYAAPEYLATGQLSAKSDVFSFGVVLLEMLSGRRAVDKNRPSGQHNLVEWAKSYLANKRKLVRVLDNRLEGQYALDEAYKVATLSLRCLATESNLRPNMDEVVKDLEQLQVPHVNQNRSVNASRGRRKSADDFTHGRIATASVSPLLNDIANT 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11846g00001 426 Gene3D Transferase(Phosphotransferase) domain 1 183 404 - -
Mupr11846g00001 426 ProSiteProfiles Protein kinase domain profile. 85 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr11846g00001 426 PANTHER OS01G0588500 PROTEIN-RELATED 53 383 - -
Mupr11846g00001 426 Gene3D Phosphorylase Kinase; domain 1 62 182 - -
Mupr11846g00001 426 CDD STKc_IRAK 91 382 - -
Mupr11846g00001 426 FunFam Serine/threonine-protein kinase BIK1 52 182 - -
Mupr11846g00001 426 Pfam Protein tyrosine and serine/threonine kinase 87 379 IPR001245 GO:0004672|GO:0006468
Mupr11846g00001 426 ProSitePatterns Protein kinases ATP-binding region signature. 91 123 IPR017441 GO:0005524
Mupr11846g00001 426 SUPERFAMILY Protein kinase-like (PK-like) 67 383 IPR011009 -
Mupr11846g00001 426 FunFam Serine/threonine-protein kinase PBS1 183 397 - -
Mupr11846g00001 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11846g00001 Mupr-Chr11846 4878 7882 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11846g00001 71 379 Glycoside Hydrolase AT3G07070 48.882 2.51e-95 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mupr11846g00001 PK_Tyr_Ser-Thr 4.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11846g00001 - - gmx:100812366 649.047