Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11843g00001 ATGGACATGTACGGTTCCTTTTTCACCTCTTACGATTGCTTACTCACCGACGGTTTTCTAGACTTCTCCAACATCACCACCGACACCCACTACCACCGCCTTCCTCCGCCGCAAAACCCTCCGTTCTCCCACGACCCCAATTTCTTCTTCAATTTTCCCTCCATTCCAAGCCACGAAGCAGCGGAGCTGGAATGGCTCTCCCAGTTCGTGGACGACAACGCGACGTCGTTTCACGACTTCCCGCCATCGGTGTCTACGGGATCCAACACGACGCCGTTTCTCGCGAATAACAATAATAATCACAGCAACGATAACGATAATAATGATCCCAAAGCATCATCACTGGTGGCCGGCAAATCGAGAGCGAGGAGGGAGGGGTCGGCGGCCGGAGATGGAGGCGCGCGGCGGTGCAGCCACTGCGCCTCGGAAAAGACGCCGCAGTGGCGAAGCGGACCGATGGGGCCGAAGACGCTGTGCAACGCGTGCGGAGTGCGGTTCAAGTCGGGTCGACTGGTACCCGAATACCGACCCGCCGCGAGCCCCACGTTCGTCCTGACTCAGCACTCCAACTCCCACCGCAAGGTCATGGAGCTCCGGCGCCAGAAGGAGCTGCTCCGCCAGCAACAGCAGCAGCAAGAGCAATGCTACCGTCACACCCACGATTTCAAAGTCTGCTGA 678 0.5826 MDMYGSFFTSYDCLLTDGFLDFSNITTDTHYHRLPPPQNPPFSHDPNFFFNFPSIPSHEAAELEWLSQFVDDNATSFHDFPPSVSTGSNTTPFLANNNNNHSNDNDNNDPKASSLVAGKSRARREGSAAGDGGARRCSHCASEKTPQWRSGPMGPKTLCNACGVRFKSGRLVPEYRPAASPTFVLTQHSNSHRKVMELRRQKELLRQQQQQQEQCYRHTHDFKVC 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11843g00001 225 CDD ZnF_GATA 136 183 IPR000679 GO:0006355|GO:0043565
Mupr11843g00001 225 ProSitePatterns GATA-type zinc finger domain. 137 162 IPR000679 GO:0006355|GO:0043565
Mupr11843g00001 225 PANTHER GATA TRANSCRIPTION FACTOR 119 212 - -
Mupr11843g00001 225 MobiDBLite consensus disorder prediction 80 152 - -
Mupr11843g00001 225 FunFam GATA transcription factor 128 213 - -
Mupr11843g00001 225 MobiDBLite consensus disorder prediction 80 114 - -
Mupr11843g00001 225 Pfam GATA zinc finger 137 170 IPR000679 GO:0006355|GO:0043565
Mupr11843g00001 225 SMART GATA_3 131 181 IPR000679 GO:0006355|GO:0043565
Mupr11843g00001 225 Coils Coil 195 215 - -
Mupr11843g00001 225 ProSiteProfiles GATA-type zinc finger domain profile. 131 167 IPR000679 GO:0006355|GO:0043565
Mupr11843g00001 225 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 134 195 - -
Mupr11843g00001 225 Gene3D - 133 219 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11843g00001 Mupr-Chr11843 22757 24340 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11843g00001 34 212 C2C2-Gata Transcription Factor Family AT2G45050 50.230 5.57e-60 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mupr11843g00001 GATA 3.9e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11843g00001 - - gsj:114418730 314.694