Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11840g00002 ATGGGTCGCGAAACTATGTTCCTTCCTGCCCCACCAACCACTGCCACCACCACAGTGAACCCAGTGGCAGCACCAACTGCACCACCTACCTCTCTTGCTCCTGGCTTCAGGTTCCACCCAACAGACGAAGAGCTTGTTATTTACTACCTCAAGCGCAAGGTTTCTGGTAAAGCCTTCCGATTTGATGCCATATCTGAGGTTGATATATACAGGAGCGAGCCCTGGGACCTAGCAGATAAGTCAAGGTTGAAGACCAGGGACCAGGAGTGGTATTTTTTTAGTGCATTGGACAAGAAATATGGGAATGGTGGGAGGATGAATAGGGCTACAAGCAAAGGGTATTGGAAAGCCACTGGAAATGATCGACCAGTGAGGCACGAACAAAGGACCGTGGGGTTGAAGAAAACTTTGGTGTTTCATAGTGGACGAGCTCCTGATGGGAAGAGGACTAATTGGGTCATGCACGAGTACAGGCTTATGGATGAGGAGCTAGAGAGGGCTGGGACTGGATCCTCTCAGCCTCAGGATGCGTATGTTTTGTGTAGAGTATTTCACAAAAATAACATAGGACCTCCAAATGGGCAACGATATGCACCCTTCATTGAAGAAGAATGGGATGATGCAACGGGAATGGTTCCAGGGGCAGAGCCTGTGGATAACGGCTCCTACCGGCCCCGTGTCGAAGGCAACCGGGGTGTTTTATGCGCTGAAAGGAGAAATGATGTTGTACAG 732 0.4986 MGRETMFLPAPPTTATTTVNPVAAPTAPPTSLAPGFRFHPTDEELVIYYLKRKVSGKAFRFDAISEVDIYRSEPWDLADKSRLKTRDQEWYFFSALDKKYGNGGRMNRATSKGYWKATGNDRPVRHEQRTVGLKKTLVFHSGRAPDGKRTNWVMHEYRLMDEELERAGTGSSQPQDAYVLCRVFHKNNIGPPNGQRYAPFIEEEWDDATGMVPGAEPVDNGSYRPRVEGNRGVLCAERRNDVVQ 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11840g00002 244 FunFam Nac domain-containing protein 86 41 189 - -
Mupr11840g00002 244 Gene3D NAC domain 41 189 IPR036093 GO:0003677|GO:0006355
Mupr11840g00002 244 MobiDBLite consensus disorder prediction 1 23 - -
Mupr11840g00002 244 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 31 195 - -
Mupr11840g00002 244 Pfam No apical meristem (NAM) protein 34 159 IPR003441 GO:0003677|GO:0006355
Mupr11840g00002 244 ProSiteProfiles NAC domain profile. 32 186 IPR003441 GO:0003677|GO:0006355
Mupr11840g00002 244 SUPERFAMILY NAC domain 27 187 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11840g00002 Mupr-Chr11840 13048 14361 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11840g00002 1 230 NAC Transcription Factor Family AT3G10480 59.091 2.34e-101 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr11840g00002 NAM 6.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11840g00002 - - gmx:100808783 433.721