Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11834g00004 ATGGCGAAAAAGGCAAAAGGGTCTCTCTCTGCTTCTTCAGCTTCTGCCTCTTCCGGCAAACTAGTGTTGAGGATTAAATCAAATGAGGGAATCAAGAGATCGGTGCCACAGACTAATTCAAGAAAGAAACCCAAAGCAAAGCAAAAGAAGAACAAACAAAAGTTTGATGCTAAGAAACCGAAGAAGCCTCCCACTGCTTTCTTCTACTTCTTGGAGGATTTCCGTAAAGAATTTCAAGAGCAGAATCCAGATGTGAAGTCAATGCGTGATATTGGCAAGGCATGTGGAGAGAAGTGGAAAACAATGACTTATGAGGAGAAGGTTCAATACTATGATATAGCAACAGAAAAACGTGCAGAATTTGATACAGCAATGGCAGAATTTAAGAAGAAAATGGAAAGTGGTGAGCTTGAAGAAACCGATGAGGAATCAGAGTTTGATGAGTAA 447 0.4027 MAKKAKGSLSASSASASSGKLVLRIKSNEGIKRSVPQTNSRKKPKAKQKKNKQKFDAKKPKKPPTAFFYFLEDFRKEFQEQNPDVKSMRDIGKACGEKWKTMTYEEKVQYYDIATEKRAEFDTAMAEFKKKMESGELEETDEESEFDE 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11834g00004 148 SMART hmgende2 59 130 IPR009071 -
Mupr11834g00004 148 MobiDBLite consensus disorder prediction 25 62 - -
Mupr11834g00004 148 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 36 145 IPR031061 -
Mupr11834g00004 148 MobiDBLite consensus disorder prediction 38 57 - -
Mupr11834g00004 148 SUPERFAMILY HMG-box 52 133 IPR036910 -
Mupr11834g00004 148 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 60 129 IPR009071 -
Mupr11834g00004 148 Pfam HMG (high mobility group) box 60 129 IPR009071 -
Mupr11834g00004 148 CDD HMG-box_AtHMGB1-like 61 121 - -
Mupr11834g00004 148 Gene3D High mobility group box domain 54 144 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11834g00004 Mupr-Chr11834 17334 21329 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Mupr11834g00004 HMG_box 4.6e-18 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11834g00004 - - gmx:100809401 188.348