Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11827g00001 ATGAGCAATCCTCCGTTGCCAATAGCGTACCAAGCATGGACAAGCCAGGCAGTACCGGATTGGTTGAACAAAGGAGACAACGCGTGGCAAATGATGTCAGCCACCCTGGTCGGGATTCAGAGCATGCCGGGCCTGGTCATCCTCTACGGAAGCATCGTCAAAAAGAAATGGGCCGTCAACTCCGCTTTCATGGCTCTCTATGCTTTCGCCGCTGTCATAATCTGTTGGGTCACCTGGGCCTATAAGATGTCCTTCGGGGAGAAACTCTTACCCTTTTGGGGCAAAGCTGGGCCTGCGCTGGGCCAGAGGTTTCTCATCAAGCAGGCCGGCCTGCCCGCCACGACTCATTATTATAGTAACGAGGTTGTGGAGACCGCAGAGATAGAGCCGTTTTATCCCATGGCTACTATGGTGTGGTTCCAGGGTGTTTTTGCAGCCATTGCACTTGTGCTCTTGGCTGGCTCCGTTCTTGCTAGGATGAACTTCAAGGCCTGGATGATGTTTGTGCCCCTTTGGCTCACTTTTTCTTACACCGTTGGTGCCTTTAGTTTGTGGGGTGGGGGTTTCTTGTTCCACTGGGGTGTCATGGATTACTCTGGTGGTTATGTCATTCATCTCTCTTCCGGGATTGCTGGCTTCACTGCTGCTTATTGGGTGGGGCCAAGATCGAAAAAGGACAGAGAGAGATTCCCGCCAAACAACGTGTTACTAACGTTGGCGGGGGCAGGGCTACTATGGTTGGGATGGGCAGGTTTCAACGGTGGAGATCCGTACTCGGCGAACACGGACTCATCGATGGCGGTGCTCAACACCAACATTTGCGCCGCCACTAGCCTCCTCGTATGGACGTGGCTCGATGTTATATTCTTCAAGAAACCCTCAGTTATTGGAGCCGTTCAGGGAATGATTACTGGCCTTGTTTGCATCACTCCCGCAGCTGGTCTGGTTCAAGGATGGGCTGCCATAGTGATGGGAGTGCTTTCAGGCAGTGTGCCATGGTACACCATGATGGTATTGGGAAAAAGGTTTAAAATATTTGAAATGGTTGATGACACCCTTGCTGTGTTCCACACTCATGCTGTGGCTGGCTTTCTTGGAGGCATACTTACTGGCATATTTGCTGAGCCACGTCTGAGCTCACTCTTCCTTCCAGTCACCAACTCCAAAGGAGCAATCTATGGAGGCCCTGGAGGAGTCCAAATCCTCAAACAAATCGTCGGAGGTTTATTCATCATTGGCTGGAACATTGTTGCCACTTCAATAATTTGTGTGCTTATTGGTTTCATAGTTCCTCTCAGAATGACCGAGGAAGAGCTTCTCATTGGGGATGATGCAGTTCATGGAGAAGAGGCTTATGCTCTGTGGGGTGATGGAGAGAAACTTAGCCTCTACAAAGATGATACCACACACCATGGTATGGTATCTAGTGGTGCCACTCAAGTGGTCTAG 1449 0.5066 MSNPPLPIAYQAWTSQAVPDWLNKGDNAWQMMSATLVGIQSMPGLVILYGSIVKKKWAVNSAFMALYAFAAVIICWVTWAYKMSFGEKLLPFWGKAGPALGQRFLIKQAGLPATTHYYSNEVVETAEIEPFYPMATMVWFQGVFAAIALVLLAGSVLARMNFKAWMMFVPLWLTFSYTVGAFSLWGGGFLFHWGVMDYSGGYVIHLSSGIAGFTAAYWVGPRSKKDRERFPPNNVLLTLAGAGLLWLGWAGFNGGDPYSANTDSSMAVLNTNICAATSLLVWTWLDVIFFKKPSVIGAVQGMITGLVCITPAAGLVQGWAAIVMGVLSGSVPWYTMMVLGKRFKIFEMVDDTLAVFHTHAVAGFLGGILTGIFAEPRLSSLFLPVTNSKGAIYGGPGGVQILKQIVGGLFIIGWNIVATSIICVLIGFIVPLRMTEEELLIGDDAVHGEEAYALWGDGEKLSLYKDDTTHHGMVSSGATQVV 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11827g00001 482 Gene3D Ammonium transporter AmtB like domains 8 455 IPR029020 -
Mupr11827g00001 482 Pfam Ammonium Transporter Family 28 452 IPR024041 GO:0008519|GO:0016020|GO:0072488
Mupr11827g00001 482 SUPERFAMILY Ammonium transporter 21 434 - -
Mupr11827g00001 482 PANTHER AMMONIUM TRANSPORTER MEP2 13 461 IPR001905 GO:0008519|GO:0016020|GO:0072488
Mupr11827g00001 482 FunFam Ammonium transporter 9 455 - -
Mupr11827g00001 482 ProSitePatterns Ammonium transporters signature. 197 222 IPR018047 GO:0008519|GO:0016020|GO:0072488
Mupr11827g00001 482 NCBIfam ammonium transporter 26 452 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11827g00001 Mupr-Chr11827 615 4949 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11827g00001 134 471 Inorganic Solute Cotransporters AT2G38290 69.527 1.22e-163 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11827g00001 K03320 - gmx:100785993 897.116