Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11820g00004 ATGGATTCTTTAGAAGACAGCGGCTGTTGGGATTTTCTCGATTACTCTTTCATCGATCAAGCGCCCCCAGATTTCCTTTGGTCTAATCATAGTGTGAGTGCCGAAATTGACATTCCAGGTGATGCTGTTGCTTGTCAAGAGAACACCAAGAAGAGGTTCTGCGAGTTGAGCTCTGTTTTGGAACCTGGGAGACCTGTGAGAACAGATAAACCAGCTATACTTGATGATGCTATCAGAGTCTTGAGCCAACTTAAAACTGAAGCTCAGGAGCTCAAAAATACAAATGAAAAATTATTAGAGGAAATAAAAAGTTTAAAGGCAGAAAAAAATGAACTTCGTGAAGAGAAACTTGTTCTGAAAGCAGATAAGGAAAGGATTGAGAAGCAGTTGAAAGCCTTGCCCATTGCACCTGCAGGATTCATGCCTCCTCCTGTAGCAGCTGCATATCAAGCAGGGGTGAACAAGATGGCTGTTTATCCAAACTATGGCTATATCCCAATGTGGCAATATCTTCCTCAATCTGCCAGAGATACATCACATGATCATGAGCTCAGGCCTCCTGCTGCATATTTACCAACTAAAACAACAAATTTTGCCTAA 600 0.4183 MDSLEDSGCWDFLDYSFIDQAPPDFLWSNHSVSAEIDIPGDAVACQENTKKRFCELSSVLEPGRPVRTDKPAILDDAIRVLSQLKTEAQELKNTNEKLLEEIKSLKAEKNELREEKLVLKADKERIEKQLKALPIAPAGFMPPPVAAAYQAGVNKMAVYPNYGYIPMWQYLPQSARDTSHDHELRPPAAYLPTKTTNFA 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11820g00004 199 Coils Coil 74 129 - -
Mupr11820g00004 199 Gene3D - 46 117 IPR036638 GO:0046983
Mupr11820g00004 199 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 48 107 IPR036638 GO:0046983
Mupr11820g00004 199 PANTHER BHLH TRANSCRIPTION FACTOR 49 189 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
Mupr11820g00004 199 MobiDBLite consensus disorder prediction 178 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11820g00004 Mupr-Chr11820 7290 13019 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11820g00004 40 189 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G14410 65.161 3.75e-64 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11820g00004 - - gmx:100787583 338.191