Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1181g00003 ATGAAAGATGGTGGTGGTAGGAAGCAGGGTGCACCCTCACCCTGTGCTGCATGCAAACTCCTTCGCAGAAGGTGTGCTCAGGACTGTGTTTTTGCTCCTTATTTTCCCGCAGATGAACCCCAGAAGTTCGCTAATGTGCACAAAGTCTTTGGTGCTAGCAATGTCAACAAGATGCTTCAGGACTTAGCAGAGCATCAGAGAGGAGATGCAGTGAGCAGCATGGTGTACGAGGCGAATGCAAGAGTGAGAGATCCAGTGTATGGGTGCGTAGGGGCCATCTCATCTCTTCAGCAACAGATTGATGTGTTGCGGACCCAACTGGCGGTGGCCCAGGCTGAGGCTGTGCACCTCAGGGTGCGCCAATCTGCATCCCTCTACAGCCCCACTAGCCCATCCAATAGTGGCTCTCCATCATCCAAGATCATTGAATCACAACCCAACCCTATTTTTGACATGGACATGGTGGTGGACCAGACCACCTATGGTGATTCCATTTGGTGA 501 0.519 MKDGGGRKQGAPSPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLAEHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLRTQLAVAQAEAVHLRVRQSASLYSPTSPSNSGSPSSKIIESQPNPIFDMDMVVDQTTYGDSIW 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1181g00003 166 Coils Coil 93 113 - -
Mupr1181g00003 166 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Mupr1181g00003 166 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 12 133 - -
Mupr1181g00003 166 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1181g00003 Mupr-Chr1181 32573 36126 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1181g00003 7 166 AS2 family AT1G31320 75.758 1.14e-71 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mupr1181g00003 LOB 6.3e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1181g00003 - - gmx:100306560 275.404